Query= MSMg01no181_j01.b1 MSMg01no181_j01.b1 CHROMAT_FILE:
MSMg01no181_j01.b1 PHD_FILE: MSMg01no181_j01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:03 2005
(587 letters)
>mm_chr1_90432849_90433835
Length = 987
Score = 752 bits (389), Expect = 0.0
Identities = 425/437 (97%), Gaps = 2/437 (0%)
Strand = Plus / Minus
Query: 5 gaattctgaactattacctctcaactaggctactaggagaattctagagcacctgtctcc 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 436 gaattctgaactattacatctcaactaggctactaggagaattctagagcacctgtctcc 377
Query: 65 aaaagcaacctg-gattctttccttagttgtggcttctcagagtttgtttactgcatttt 123
|||||||||||| | |||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 376 aaaagcaacctgtg-ttctttccttagttgtggcttctcagagttcgtttactgcatttt 318
Query: 124 catagactccaaagacactggcattatcagcactgagccagaaggcccccatcttctgca 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 317 catagactccaaagacactggcattatcagcactgagccagaaggcccccatcttctgca 258
Query: 184 gaactagattatttataatatccatcagtaactggtaactaggagaatgacttgctcagc 243
||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||||
Sbjct: 257 gaactagattatttataatattcatcagtaactggtaactaggggagtgacttgctcagc 198
Query: 244 aggcaaaagtatgtgtcacacaagccatattatctgaggtctgtccctggagcccctagt 303
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 197 aggcaaaagtatgtgtcacaaaagccatattatctgaggtctgtccctggagcccctagt 138
Query: 304 ggaaggagagaaatgaatcttaagagttgttctctggggccagagagatggctcagcagt 363
||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 137 ggaaggaaagaaattaatcttaagagttgttctctggggccagagagatggctcagcaat 78
Query: 364 taagactgctctttcagaagtcctgggtttaattcccagcaaccacatggtggctcacaa 423
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 taagactgctctttcagaggtcctgggtttaattcccagcaaccacatggtggctcacaa 18
Query: 424 ccatctctaatggggta 440
|||||||||||||||||
Sbjct: 17 ccatctctaatggggta 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 587
Length of database: 987
Length adjustment: 10
Effective length of query: 577
Effective length of database: 977
Effective search space: 563729
Effective search space used: 563729
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no181_j01.g1 MSMg01no181_j01.g1 CHROMAT_FILE:
MSMg01no181_j01.g1 PHD_FILE: MSMg01no181_j01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:03 2005
(657 letters)
>mm_chr1_90385385_90386441
Length = 1057
Score = 1208 bits (625), Expect = 0.0
Identities = 649/657 (98%)
Strand = Plus / Plus
Query: 1 tgtattttcctggtgaggtcacacactgacttaaaaatagcatctgtggagcccctcggt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtattttcctggtgaggtcacacactgacttaaaaatagcatctgtggagcccctcggt 260
Query: 61 ttatcatttccacctttgcatcctggatctgcaatgtgctgctcacaaaaggcgaaggag 120
|||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 261 ttatcatttccacctttgcatcctggatctgcaatgtgctgctcacaataggtgaaggag 320
Query: 121 attttcctttcgggaagcagtgggcttaagggacctcctggcagacagttgggacttcat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 attttcctttcgggaagcagtgggcttaagggacctcctggcagacagttgggacttcat 380
Query: 181 tatctgctgccctccaccctgaactatttttagtgttcataagaaggtgggagggacatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tatctgctgccctccaccctgaactatttttagtgttcataagaaggtgggagggacatc 440
Query: 241 actgtttcctgtcattggctctgaatggaaagctaagctcccgcgaaatgagtttctggg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actgtttcctgtcattggctctgaatggaaagctaagctcccgcgaaatgagtttctggg 500
Query: 301 caaaatcaggcacccacttgaaacagtcagtgagagcccataactctgaaaacacagcct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 caaaatcaggcacccacttgaaacagtcagtgagagcccataactctgaaaacacagcct 560
Query: 361 tcctacctctgtactctacaagatgtgacagttgggagcagtgagaagggcacttgttac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcctacctctgtactctacaagatgtgacagttgggagcagtgagaagggcacttgttac 620
Query: 421 aaggcactgggctgggttggtccttggcttcttttaacatccctggatgcaggaattgac 480
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 621 aaggcactgggctgggttggtccttggcttcttttaacatccctggatgcaggaatcgac 680
Query: 481 agcctagcatttcttgacactcaaagttccctaccttagaagcaacacattgtttggatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agcctagcatttcttgacactcaaagttccctaccttagaagcaacacattgtttggatc 740
Query: 541 tgtctgagaaaacccccttcaccaggcactgaagtttcagttcaagtgatctgcagaaca 600
||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 agtccgagcaaacccctttcaccaggcactgaagtttcagttcaagtgatctgcagaaca 800
Query: 601 cagcacctagtatgttccttctgtcccagttttgaatcaagaaagcagattcagaag 657
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 801 cagcacctagtatgttccttctgccccagttttgaatcaagaaagcagattcagaag 857
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 657
Length of database: 1057
Length adjustment: 10
Effective length of query: 647
Effective length of database: 1047
Effective search space: 677409
Effective search space used: 677409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
