CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGAGGATCCGCGGA
ATTCAGTAAGAATGTCGTCTATTCAGTGTTATTCAGTATTGCCTCTAATA
TTGTAAGAGAGATAGTGAAAGAAATCAGGCATTAACTACTACATAAGAGT
TAGAAATCTCAGGGCAAGCTTAGCAAAGCAAGTTTAGAATTCTTACTATA
GTTATGTATGTCAGACTACTTATTAGTAGAAAGTCCCCCCACACAATCAC
TTAGAATAAAAGCCAAGCATCACATATACAGGAATTTACAATGGTTTAGG
AAGTAGATCAGGCTGTGATTTGAGGAGAAACTAGTATATTGCATTATTTT
TGAGAAGGTTAGCTAGAGCAGAACTTCCTAATTAGAACCATGACTTGGGC
ATGAAAGCCCTTGCCCCCCCAGTGTAAAGACCTTACACCTGGCTTCTAAG
AATATGGCTGACCTTAGATAGAGCTGACTTTGTCTCAGTTGTTTTATTGC
CCAGTTCCTGCCAGTCTTTATGCCTGCATTCCTCTGGTTTGTGTAAGGGT
CATTAAGCATCCAGTATCCTCATTGTATCTTGCTGATGTGTCTTCTAACT
TCTCCATCTCTCTTCAGTATTATATGTCTGGCGCTTCATTCGACAAACCG
TTTTCCCACTCAGTATTTTCTCTTGCGCCCCTATTTATTTGACCCCTCTT
GTCCGATCCTGTCCATCTGAATATGTACCTGAC

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCCTACCTGGCTTATGACCTCTGCA
GGCAAGAGCTTTTCATCAGGCAAGAGCTTTTCATCAGTTTGCAGTACAAA
GTATCAATTTCCTCTGTGGAGTGACCTCAGAGCAATGGGTTATCCCCCAT
ACAGGGGTGTCGTTATTGTACAAGTAGGTACATCCTGCCCACAGCTGCTA
CAGGTCCTTCTTTCCCGCGGTGACACCAACGACACAGACACCAAGTTGGG
TTCACGCAGCAACTTTACTTCGGGCTTTTTCTTTTACAGCTCTCTTCCCC
AGCAGCTTCTTCTTAGGGCAAGGGCTAAACTACTCCTATTACAACAGCTT
CTCTTATTCTANCCCTACTCACAGCAAGGGCTAAAACTACTCTACTACTA
CTGGCTTCTTCCTAGGGCAAGGGCTAAAACTCCTATTACAACTTGCACCG
ACTCACCTCACTCTAGCTCCACCCCACCTATCCTATCAGAATTATCTCTC
TCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC
TCTTTCTCTCTTTGTCTCTCACTTTGTCTAAATATACCCCAATTTTTTAT
TGATTGAAATTATCTATAAAAGGTCATTATATTATACATATTAACCACTT
ATTTAAACTCG

Query= MSMg01no182_a11.g1 MSMg01no182_a11.g1 CHROMAT_FILE:
MSMg01no182_a11.g1 PHD_FILE: MSMg01no182_a11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:55:39 2005
         (507 letters)



>mm_chr1_132273731_132274637
          Length = 907

 Score =  820 bits (424), Expect = 0.0
 Identities = 463/492 (94%), Gaps = 27/492 (5%)
 Strand = Plus / Plus

                                                                       
Query: 1   cctacctggcttatgacctctgcaggcaagagcttttcatcaggcaagagcttttcatca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cctacctggcttatgacctctgcaggcaagagcttttcatcaggcaagagcttttcatca 260

                                                                       
Query: 61  gtttgcagtacaaagtatcaatttcctctgtggagtgacctcagagcaatgggttatccc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtttgcagtacaaagtatcaatttcctctgtggagtgacctcagagcaatgggttatccc 320

                                                                       
Query: 121 ccatacaggggtgtcgttattgtaca-----------------------agtaggtacat 157
           ||||||||||||||||||||||||||                       |||||||||||
Sbjct: 321 ccatacaggggtgtcgttattgtacatacaggggtgtcgttattgtacaagtaggtacat 380

                                                                       
Query: 158 cctgcccacagctgctacaggtccttctttcccgcggtgacaccaacgacacagacacca 217
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctgcccacagctgctacaggtccttctttcccgcggtgacaccaacgacacagacacca 440

                                                                       
Query: 218 agttgggttcacgcagcaactttacttcgggctttttcttttacagctctcttccccagc 277
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 agttgggttcacgcagcaactttacttcgggctttttcttttacagctctcttccccagc 500

                                                                       
Query: 278 agcttcttcttagggcaagggctaaactactcctattacaacagcttctcttattctanc 337
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||  
Sbjct: 501 agcttcttcttagggcaagggctaaactactcctattacaacagcttctcttactcta-- 558

                                                                       
Query: 338 c--ctactcacagcaagggctaaaactactctactactactggcttcttcctagggcaag 395
           |  |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 cttctactcacagcaagggctaaaactactctactactactggcttcttcctagggcaag 618

                                                                       
Query: 396 ggctaaaactcctattacaacttgcaccgactcacctcactctagctccaccccacctat 455
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ggctaaaactcctattacaacttgcaccgactcacctcactctagctccaccccacctat 678

                       
Query: 456 cctatcagaatt 467
           || |||||||||
Sbjct: 679 ccaatcagaatt 690


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 507
Length of database: 907
Length adjustment: 10
Effective length of query: 497
Effective length of database: 897
Effective search space:   445809
Effective search space used:   445809
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)