Query= MSMg01no182_i13.b1 MSMg01no182_i13.b1 CHROMAT_FILE:
MSMg01no182_i13.b1 PHD_FILE: MSMg01no182_i13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:18 2005
(367 letters)
>mm_chr1_163665018_163665783
Length = 766
Score = 652 bits (337), Expect = 0.0
Identities = 355/361 (98%), Gaps = 1/361 (0%)
Strand = Plus / Plus
Query: 5 gaattcttcagctgcccaggaaggaaaagagtcagtgggccgaaaaaaaaacctcatcca 64
||||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 205 gaattcttcagctgctcaggaaggaaaagagtcagtgggccgaaaaaaaa-cctcatcca 263
Query: 65 gacttctccacacttcgccctcccgaggactcacgggctttgctaagagactgggagcca 124
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 264 gacttctccacacttcgccctccagaggactcacgggctttgctaagagactgggagcca 323
Query: 125 acaacagatttccgcagccagtgtagactgggcctccggcttctgttactgaaaacagga 184
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 agaacagatttccgcagccagtgtagactgggcctccggcttctgttactgaaaacagga 383
Query: 185 gacaatggcccaagcctccttcgggaagcagcacagctttggttttattgactcttccct 244
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 gacaatggcccaaggctccttcgggaagcagcacagctttggttttattgactcttccct 443
Query: 245 ttttcttgtcattttcttccccaaatatccatcccaggtctaaatgtctgttactcagtt 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 ctttcttgtcattttcttccccaaatatccatcccaggtctaaatgtctgttactcagtt 503
Query: 305 agtttgtgctagctggtatgccgagattaagagtgggactttgctctggatcgggttctt 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 agtttgtgctagctggtatgccgagattaagagtgggactttgctctggatcgggttctt 563
Query: 365 t 365
|
Sbjct: 564 t 564
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 367
Length of database: 766
Length adjustment: 9
Effective length of query: 358
Effective length of database: 757
Effective search space: 271006
Effective search space used: 271006
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no182_i13.g1 MSMg01no182_i13.g1 CHROMAT_FILE:
MSMg01no182_i13.g1 PHD_FILE: MSMg01no182_i13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:18 2005
(326 letters)
>mm_chr1_163791093_163791818
Length = 726
Score = 594 bits (307), Expect = e-174
Identities = 322/327 (98%), Gaps = 2/327 (0%)
Strand = Plus / Minus
Query: 1 tttaaaaaatgttcacctcagaatgaaagagtttcattttattagattttggaaaatatt 60
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 394 tttaaaaaatgttcacctcagaatgaaagagtttcattttattaaattttggaaaatatt 335
Query: 61 tgccaaagatttaggtatagactaaaaagctactatctgttgcctttccaattgcacaac 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tgccaaagatttaggtatagactaaaaagctactatctgttgcctttccaattgcacaac 275
Query: 121 tatcttaaagctcatgtaattgaagtctagaacagtggttctcagacttgggtgtgattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 274 tatcttaaagctcatgtaattgaagtctagaacagtggttctcagacttgggtgtgattc 215
Query: 181 ccccataggggtcacatatcagatatttattatgattcataacagtagtagtaaaataat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 214 ccccataggggtcacatatcagatatttattatgattcataacagtagtagtaaaataat 155
Query: 241 tttatatgaagtagtagtaaaataattttatggttagggggatacccaaacatgaggaac 300
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 154 tttatatgaagtagtagtaaaataattttatggttagggggataccaaaacatgaggaac 95
Query: 301 tggattaaagggttag-agcattagga 326
|| ||||||||||| | ||||||||||
Sbjct: 94 tgtattaaagggtt-gcagcattagga 69
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 326
Length of database: 726
Length adjustment: 9
Effective length of query: 317
Effective length of database: 717
Effective search space: 227289
Effective search space used: 227289
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
