Query= MSMg01no182_m08.b1 MSMg01no182_m08.b1 CHROMAT_FILE:
MSMg01no182_m08.b1 PHD_FILE: MSMg01no182_m08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:37 2005
(328 letters)
>mm_chr1_77827757_77828485
Length = 729
Score = 464 bits (240), Expect = e-135
Identities = 302/325 (92%), Gaps = 7/325 (2%)
Strand = Plus / Minus
Query: 7 ggaattctgtaatctcc--tgagtctac-attcttttcagtgttatgattgtaaggcctt 63
|||||||||||| ||| ||||||||| || ||||||||||||||||||||||| |||
Sbjct: 528 ggaattctgtaa--tcctttgagtctactttttttttcagtgttatgattgtaaggtctt 471
Query: 64 tccatgttgctgtattctgtagtgacttgctttcctgta-tggttttacagaagactcta 122
||||| ||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct: 470 tccatcttgctgtattctgtagtgacttgctttcctgtattggttttacaggagactcta 411
Query: 123 gctatgaggcccctaggatctgctgaagcactcaagaataggacttgctctctgtgagca 182
||||||||| |||| ||||||||||||||||||||| ||||||| |||||||||||||||
Sbjct: 410 gctatgaggaccctgggatctgctgaagcactcaagtataggacatgctctctgtgagca 351
Query: 183 acaagtaagcccattcttaanatggttggggccaagaatttgggccttagcctcatttgt 242
|||||| ||||||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct: 350 acaagt-agcccattcttaagatggttgggggcaagaatttgggccttagcctcatttgt 292
Query: 243 tatatatggnnccccctccatggacaatatttgttttaaatgcccctactaccccaagtc 302
||||| ||| |||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 291 tatatttggggccccctccatggacaatatttgttttaaatgcccctactagcccaagtc 232
Query: 303 agatatcctcatgaccctgtacata 327
|||||||| ||||||||||||||||
Sbjct: 231 agatatccacatgaccctgtacata 207
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 328
Length of database: 729
Length adjustment: 9
Effective length of query: 319
Effective length of database: 720
Effective search space: 229680
Effective search space used: 229680
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no182_m08.g1 MSMg01no182_m08.g1 CHROMAT_FILE:
MSMg01no182_m08.g1 PHD_FILE: MSMg01no182_m08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:56:37 2005
(287 letters)
>mm_chr1_77687389_77688076
Length = 688
Score = 534 bits (276), Expect = e-156
Identities = 285/288 (98%), Gaps = 1/288 (0%)
Strand = Plus / Plus
Query: 1 tctgtgggttttggctgctgtttgtttgtttgctcttctatgttgcctctgcaaaccttc 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 201 tctgtgggttttggctgctgtttgtttgtttgctcttctatgttgcctatgcaaaccttc 260
Query: 61 tatttcccttttatggtgatttctttgttctggtggtatataattgtttactgcaaactc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tatttcccttttatggtgatttctttgttctggtggtatataattgtttactgcaaactc 320
Query: 121 atctttgctaggatcatggctggct-atggaagcccatatgtggaatatctttttaaaac 179
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 321 atctttgctaggatcatggctggcttatggaagcccatatgtggaatatctttttaaaac 380
Query: 180 tttgtctgaaactccaggggttctgaactctatgtatgttaactaatttttgtttgggaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tttgtctgaaactccaggggttctgaactctatgtatgttaactaatttttgtttgggaa 440
Query: 240 tttcataccatatgcagtgtgttttcatatccagcaagcaaaggaatt 287
|||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 441 tttcataccacatgcagtgtgttttcatatccagcaagcaaaggaatt 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 688
Length adjustment: 9
Effective length of query: 278
Effective length of database: 679
Effective search space: 188762
Effective search space used: 188762
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
