Query= MSMg01no183_b07.b1 MSMg01no183_b07.b1 CHROMAT_FILE:
MSMg01no183_b07.b1 PHD_FILE: MSMg01no183_b07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:00 2005
(668 letters)
>mm_chr1_91820018_91821085
Length = 1068
Score = 1255 bits (649), Expect = 0.0
Identities = 661/665 (99%)
Strand = Plus / Plus
Query: 4 ggaattccaagctgcgaatatcgcgctggaggagagaactcaggccaagtggagcaggga 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattccaagctgcgaatatcgcgctggaggagagaactcaggccaagtggagcaggga 263
Query: 64 cagccggtctgggtatctggggagagattctgggagagtttagaggcgcggccaaggcgg 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 cagccggtctgggtatctggggagagattctgggagagtttagaggcgcggccaaggcgg 323
Query: 124 gcttcctactaggaagagagatacggctgggtgggctaccgagaagctgcgggagtataa 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 gcttcctactaggaagagagatacggctgggtgggctaccgagaagctgcgggagtataa 383
Query: 184 tgggcgctcttcatccaactcttgatgtagcagacttgtgaatgtggggaaagctgaaga 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tgggcgctcttcatccaactcttgatgtagcagacttgtgaatgtggggaaagctgaaga 443
Query: 244 gcgggaaggggaacacacatcacatacacactactgctctcacttgctcctgcgcatact 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 gcgggaaggggaacacacatcacatacacactactgctctcacttgctcctgcgcatact 503
Query: 304 ctcaagctccagttcttctcatgcctgctcactgcggaccaactccatctggagagagct 363
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 ctcaagctccagttcttcacatgcctgctcactgcggaccaactccatctggagagagct 563
Query: 364 tcctagacaatcccagcatcttctaggaccgcagcactgtgtgttggccagaagtgccgg 423
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 564 tcctagacaatcccagcatcttctaggaccgcagcactgtgtgttggccagaagtgcccg 623
Query: 424 gggcctggtgaactgtgatcgtccacaacccccatgccctagacatcacaacccggtaga 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 gggcctggtgaactgtgatcgtccacaacccccatgccctagacatcacaacccggtaga 683
Query: 484 tgcaggtcttccaacacctcatgcctgttgtctcatacctgtcataacctaaactcaggt 543
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 684 tgcaggtcttccaacacctcatgcctgttgtctcatacctgtcataacctgaactcaggt 743
Query: 544 ccccgggtgggacagcttgacctttccccaaagccacagagggcagaagtcagcttaggg 603
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 744 ccctgggtgggacagcttgacctttccccaaagccacagagggcagaagtcagcttaggg 803
Query: 604 ctcccacttctaaactgttcaaataggcaatcaatttttatgatgtaatttataatttat 663
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 804 ctcccacttctaaactgttcaaataggcaatcaatttttatgatgtaatttataatttat 863
Query: 664 gcagg 668
|||||
Sbjct: 864 gcagg 868
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 668
Length of database: 1068
Length adjustment: 10
Effective length of query: 658
Effective length of database: 1058
Effective search space: 696164
Effective search space used: 696164
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no183_b07.g1 MSMg01no183_b07.g1 CHROMAT_FILE:
MSMg01no183_b07.g1 PHD_FILE: MSMg01no183_b07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:00 2005
(439 letters)
>mm_chr1_91934016_91934852
Length = 837
Score = 781 bits (404), Expect = 0.0
Identities = 429/438 (97%), Gaps = 4/438 (0%)
Strand = Plus / Minus
Query: 1 cactgttagaaataaactcccaaagtgtcattcaataaatacttccctgccatttacgtt 60
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 587 cactgttacaaataaactcccaaagtgtcattcaataaatacttccctgccatttacgtt 528
Query: 61 gtagacatgttcaggggcctgcacccagcactgtccaaggtcaccctagacatcacacgc 120
||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |
Sbjct: 527 gtagacatgttcaggggcctgtacccagcactgtccaaggtcaccctagacatcacacac 468
Query: 121 tgcctgtggatgagtaggatgatgaaggctttctgagacagacccaca-gtggtgtgaac 179
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 467 tgcctgtggatgagtaggatgatgaaggctttctgagacagacccacaggt-gtgtgaac 409
Query: 180 atgtctgcagctcattctcagcacagacattgctacacccaagcataagagaaggggaga 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 408 atgtctgcagctcattctcagcacagacattgctacacccaagcataagagaaggggaga 349
Query: 240 aactgactgcctgtgtgcccagcctccaccacaggcaaagacgtgaagatgtgttagcag 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 348 aactgactgcctgtgtgcccagcctccaccacaggcaaagacgtgaagatgtgttagcag 289
Query: 300 ttcttaggctatggaatcaaatgtccaattcaagtaaattcagtatttccaagcaaagac 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 288 ttcttaggctatggaatcaaatgtccaattcaagtaaattcagtatttccaagcaaagac 229
Query: 360 actagacatatgcatggctatatgaatacaatagataaatggaggatggagggatggata 419
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 228 actag--agatgcatggctatatgaatacaatagataaatggaggatggagggatggatg 171
Query: 420 gatagatagatagataga 437
||||||||||||||||||
Sbjct: 170 gatagatagatagataga 153
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 439
Length of database: 837
Length adjustment: 9
Effective length of query: 430
Effective length of database: 828
Effective search space: 356040
Effective search space used: 356040
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
