ATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAA
TTCTTGCTGGTTTCTAGTCAAGCTAACAGGAGCACAAAGCCAGAGACTGA
GAAGAAAATTCCAGAACAAGGCACCAAAGGAAGGAAACATGCATGAAAAA
AGCTGTTTCCTAGCAACCGGACACAGTACTCATCCCATTAACTGGTTCCT
TTCAGCATTGCTTACCCAGTATTAAATTCCACTGTTAGTCATCTCCATAT
CTTATGAGAGAATAGTTTTCAATTTAAAAATTTAAAGTAAGGTTGTCTAA
TCTGCAATGCTGAGTAATAAAATGGAAGCACCCAGTTTACTAATACACAC
AATTAGTAAAAAGCGTAACCAATTTTATATTCACTAACTAATCTAAAATC
TCACAGAAGCATCTACACAACGTAACTCTGTGCTTGTCCTACTGTGCTTC
AGTTGGCCAACATGAACTCCAAATAACACTTGAAAACTATACCTTTGTAC
ACCTTGGCACCAGGGAAATAGAAAGCAGCAGAAAAAAAAAAAAACTCTCC
ACTCACCACCACACAAGCTGATCTTAGAATCCCAGTCTCTTCATCCAATA
ATATGAACCATGCCATCTATCAGAACACACACATGTGCACATGCATGCAC
ACATACACAAAGTCATATGAGTCAAAGATCTCCAGTGCAGTAAAATCGGG
AGGCCGGAGTCAGCTATGTGGTTAAGAGCACTAGGTG

ATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXTGTACTCAAGAATATTAAATTGAATT
AAAGGATCGTTGACCTTGTGGTAAGATTCCCCATCTAGCTAAGTTTAAGT
CCAGGCTTGGTGGCACATGCCTTTAATTCCAGGAGACAGAAGCAAGAAGA
TCTCTGAATTCAAGTCCAACTTGGTACAGAGAAAATTCCAAGTAGAGAAA
AGCTTAAATACAGGCATGACATTACATGCCTTTAATCCCAGCATTCAGGA
GACATAGCCATGCAGATCTCTGAGTTCAAGGTCAAACTGCAGAACAAGTT
CCAGGACAGCCAAGCTAGGCAGCATGAAGGAGTTGGAAAGCAGAAAGCTG
ATGATGATATAATAGAAGAAGGGGTCATGTTCCAGCTCCACCAATCAGCA
GAACTTTTGCAGCTTTGGCCATGTGTCTCTGACTTTACAGTCAAGAGGAG
AAGGAAACTACTGGGATAATTGATGCTGGTTAGCTAGAGCTAAGAAATTA
GTCATGATTAAGAAGAGACCTGCATCTCTGAGGTGAAATCTCCTAGGAAG
TGTTTTTTGAAAGCACAAAATAGCTGTGTTCCAGAGATAGCTAAGGCTGT
ACCTTGTACTGCAGCTGTGCTTGGTAATGTCTAAGAATCACTTCAGATAG
TACTGGTTTTGAAGCTTTGAAGGAACCCTGG

Query= MSMg01no183_e06.b1 MSMg01no183_e06.b1 CHROMAT_FILE:
MSMg01no183_e06.b1 PHD_FILE: MSMg01no183_e06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:14 2005
         (653 letters)



>mm_chr1_52814597_52815649
          Length = 1053

 Score = 1185 bits (613), Expect = 0.0
 Identities = 643/659 (97%), Gaps = 10/659 (1%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcttgctggtttctagtcaagctaacaggagcacaaagccagagactgagaagaaa 64
           ||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 700 gaattcttgctggcttatagtcaagctaacaggagcacaaagccagagactgagaagaaa 641

                                                                       
Query: 65  attccagaacaaggcaccaaaggaaggaaacatgcatgaaaaaagctgtttcctagcaac 124
           |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 640 attccagaacaagggaacaaaggaaggaaacatgcatgaaaaaagctgtttcctagcaac 581

                                                                       
Query: 125 cggacacagtactcatcccattaactggttcctttcagcattgcttacccagtattaaat 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 580 cggacacagtactcatcccattaactggttcctttcagcattgcttacccagtattaaat 521

                                                                       
Query: 185 tccactgttagtcatctccatatcttatgagagaatagttttcaatttaaaaatttaaag 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 520 tccactgttagtcatctccatatcttatgagagaatagttttcaatttaaaaatttaaag 461

                                                                       
Query: 245 taaggttgtctaatctgcaatgctgagtaataaaatggaagcacccagtttactaataca 304
           ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |
Sbjct: 460 taaggttgtctaatctgcaatgctgagtactaaaatggaagcacccagtttactaataaa 401

                                                                       
Query: 305 cacaattagtaaaaagcgtaaccaattttatattcactaactaatctaaaatctcacaga 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 400 cacaattagtaaaaagcgtaaccaattttatattcactaactaatctaaaatctcacaga 341

                                                                       
Query: 365 agcatctacacaacgtaactctgtgcttgtcctactgtgcttcagttggccaacatgaac 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 340 agcatctacacaacgtaactctgtgcttgtcctactgtgcttcagttggccaacatgaac 281

                                                                       
Query: 425 tccaaataacacttgaaaactatacctttgtacaccttggcaccagggaaatagaaagca 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 280 tccaaataacacttgaaaactatacctttgtacaccttggcaccagggaaatagaaagca 221

                                                                       
Query: 485 gcagaaa----------aaaaaaaaaactctccactcaccaccacacaagctgatcttag 534
           |||||||          |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 220 gcagaaaaaaaaaaaacaaaaaaaaaactctccactcaccaccacacaagctgatcttag 161

                                                                       
Query: 535 aatcccagtctcttcatccaataatatgaaccatgccatctatcagaacacacacatgtg 594
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 160 aatcccagtctcttcatccaataatatgaaccatgccatctatcagaacacacacatgtg 101

                                                                      
Query: 595 cacatgcatgcacacatacacaaagtcatatgagtcaaagatctccagtgcagtaaaat 653
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 100 cacatgcatgcacacatacacaaagtcatatgagtcaaagatctccagtgcagtaaaat 42


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 653
Length of database: 1053
Length adjustment: 10
Effective length of query: 643
Effective length of database: 1043
Effective search space:   670649
Effective search space used:   670649
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)