Query= MSMg01no183_i02.b1 MSMg01no183_i02.b1 CHROMAT_FILE:
MSMg01no183_i02.b1 PHD_FILE: MSMg01no183_i02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:32 2005
(640 letters)
>mm_chr1_166411631_166412670
Length = 1040
Score = 1210 bits (626), Expect = 0.0
Identities = 632/634 (99%)
Strand = Plus / Plus
Query: 7 gaattctgtctctatggcttcctagcccagtgattcagctcgttgtggaatagtggcgtg 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 207 gaattctgtctctatggcttcctagcccagtgattcagctcgttgtggaatagtggcgtg 266
Query: 67 tgtttactctgtttacactgaggccgtggaatgaaaccttgttcagccataaaggtcatt 126
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 267 tgtttactctgtttacactgaggccgtgaaatgaaaccttgttcagccataaaggtcatt 326
Query: 127 ccccttcttttcctagaggtggagttgctctgatcacagatcttagcagcttagctagat 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ccccttcttttcctagaggtggagttgctctgatcacagatcttagcagcttagctagat 386
Query: 187 cttcactggaaacatatctagcagaatattattagcagcgctgttgtatctggcatggat 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 387 cttcactggaaacatatctagcagaatattattagcagcgctgttgtatctggcatggat 446
Query: 247 ctgtagtgattgcacctaagctctgacgtagccttttatcagtgattgttatctgagatt 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ctgtagtgattgcacctaagctctgacgtagccttttatcagtgattgttatctgagatt 506
Query: 307 ttaaggggttattcttttgaaggattctcagagcctttgcataacttagtccacagacct 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 507 ttaaggggttattcttttgaaggattctcagagcctttgcataacttagtccacagacct 566
Query: 367 gggcaaaccaggaagtctcctctggctgagatctgcttaaataattggtctttcaagaca 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 567 gggcaaaccaggaagtctcctctggctgagatctgcttaaataattggtctttcaagaca 626
Query: 427 acccgtggatcagataagttttggtatgcggagattgactggctaaagctgctttttgtg 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 627 acccgtggatcagataagttttggtatgcggagattgactggctaaagctgctttttgtg 686
Query: 487 taacaatagaaagagctgtcagggcttgcgtggccatccccatgctgctgagaagtctaa 546
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 687 taacaatagaaagagctgtcagggcttgcgtggccatccccatgctgctgagaagtttaa 746
Query: 547 atgcatcctgcagtgactctggtcttctatctttttagttctgtcccccccagaacaccg 606
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 747 atgcatcctgcagtgactctggtcttctatctttttagttctgtcccccccagaacaccg 806
Query: 607 acacatacacattggagtagggctgaggagatgg 640
||||||||||||||||||||||||||||||||||
Sbjct: 807 acacatacacattggagtagggctgaggagatgg 840
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 640
Length of database: 1040
Length adjustment: 10
Effective length of query: 630
Effective length of database: 1030
Effective search space: 648900
Effective search space used: 648900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no183_i02.g1 MSMg01no183_i02.g1 CHROMAT_FILE:
MSMg01no183_i02.g1 PHD_FILE: MSMg01no183_i02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:57:32 2005
(290 letters)
>mm_chr1_166550341_166551030
Length = 690
Score = 514 bits (266), Expect = e-150
Identities = 286/302 (94%), Gaps = 15/302 (4%)
Strand = Plus / Minus
Query: 1 tttcgtgctcttcctaatgtggtcacattgaaaaacaaatgttctttttctttctttgtt 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 373 tttcgtgctcttcctaatgtggtcacattgaaaaacaaatgttgtttttctttctttgtt 314
Query: 61 attaattgtgtagatggctaggcttggcttgttagagctgccagaacccaggatctaacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 attaattgtgtagatggctaggcttggcttgttagagctgccagaacccaggatctaacc 254
Query: 121 ctagccactgtagtaacaatctcagagaggatttttggc---------------tttttt 165
||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 253 ctagccactgtagtaacaatctcagagaggatttttggcttttttttttttttttttttt 194
Query: 166 ttttttttgaagactaggagacagcagctggagctggtaaactgttttgagcgaatgagt 225
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 193 ttttttttgaagactaggagacagcagctggagctggtaaactgttttgagcgaatgagt 134
Query: 226 gacatgctatgaatgatgctctcctatgactcagcaccactggaagcattaggagcagtt 285
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 133 gacatgctatgaatgatgctctcctatgactcagcaccactggaagcattaggagcagtt 74
Query: 286 aa 287
||
Sbjct: 73 aa 72
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
