Query= MSMg01no185_a16.b1 MSMg01no185_a16.b1 CHROMAT_FILE:
MSMg01no185_a16.b1 PHD_FILE: MSMg01no185_a16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:39 2005
(308 letters)
>mm_chr1_132066532_132067239
Length = 708
Score = 580 bits (300), Expect = e-170
Identities = 303/304 (99%)
Strand = Plus / Plus
Query: 5 gaattcaccaggttgttggcccagtgagccacggcttcactatcaaactcacagaatgtc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaccaggttgttggcccagtgagccacggcttcactatcaaactcacagaatgtc 264
Query: 65 attgatctgagggaaattttgaaatgggttctgactttatcttccaagctcatgagctgt 124
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 265 attgatctgagggaaattttgaaatgggttctgactttatcttccaagctcgtgagctgt 324
Query: 125 ctccttagcgcacacctggagctagtcatatagtttttaattgtgttaaagatttcaagg 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ctccttagcgcacacctggagctagtcatatagtttttaattgtgttaaagatttcaagg 384
Query: 185 tcagaacagtttgaatccaatttctttcaggttagagagaaactgattctcagcttctct 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcagaacagtttgaatccaatttctttcaggttagagagaaactgattctcagcttctct 444
Query: 245 gagggatctttttagatagctctccaagatcaaagctagtaatagaagagcttaatattt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gagggatctttttagatagctctccaagatcaaagctagtaatagaagagcttaatattt 504
Query: 305 ggat 308
||||
Sbjct: 505 ggat 508
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 308
Length of database: 708
Length adjustment: 9
Effective length of query: 299
Effective length of database: 699
Effective search space: 209001
Effective search space used: 209001
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no185_a16.g1 MSMg01no185_a16.g1 CHROMAT_FILE:
MSMg01no185_a16.g1 PHD_FILE: MSMg01no185_a16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:39 2005
(350 letters)
>mm_chr1_132197361_132198108
Length = 748
Score = 578 bits (299), Expect = e-169
Identities = 321/329 (97%), Gaps = 4/329 (1%)
Strand = Plus / Minus
Query: 23 tctagaatacatacctttaaaattatttctgaggttttttttttttcttttttttc-ttt 81
|||||||||||||||||||||||||||||||||||||||||||||| || |||||| |||
Sbjct: 748 tctagaatacatacctttaaaattatttctgaggtttttttttttt-ttctttttctttt 690
Query: 82 ttttctgcaatagggtttctctgtgtagccctggctgtcctggaactcattctgtagacc 141
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 689 ttttctgcaatagggtttctctgtgtagccctggctgtcctggaactcattctgtagacc 630
Query: 142 aggctggcctcaaactcagaaatttgcctgcctctgcctcccaagtgctgggattaaagg 201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 629 aggctggcctcaaactcagaaatttgcctgcctctgcctcccaagtgctgggattaaagg 570
Query: 202 catgtgctaccactgcccggcaagttttgtgtgttcttaagtctatcttccttgcatgat 261
||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 569 catgtgccaccactgccctgcaagttttgtgtgttcttaagtctatcttccttgcatgat 510
Query: 262 taaaattggctccagatttctaatactggctattagtatcctcctgataaaaaaaaaatc 321
|||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 509 taaaattggctccagatttccaatactggctattagtatcctcctga--aaaaaaaaatc 452
Query: 322 ctccagtagtcatttattttggacttact 350
|||||||||||||||||||||||||||||
Sbjct: 451 ctccagtagtcatttattttggacttact 423
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 350
Length of database: 748
Length adjustment: 9
Effective length of query: 341
Effective length of database: 739
Effective search space: 251999
Effective search space used: 251999
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
