Query= MSMg01no185_f04.b1 MSMg01no185_f04.b1 CHROMAT_FILE:
MSMg01no185_f04.b1 PHD_FILE: MSMg01no185_f04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:59 2005
(272 letters)
>mm_chr1_169946963_169947634
Length = 672
Score = 518 bits (268), Expect = e-151
Identities = 268/268 (100%)
Strand = Plus / Plus
Query: 5 gaattctcatcatatccttgtcaaatattactttgcatcagctcatcttgcaaagtgagt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcatcatatccttgtcaaatattactttgcatcagctcatcttgcaaagtgagt 264
Query: 65 ctcagagatgacaagcccattcttagtaagtaactaacttagagctaaggtgtgaatcca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctcagagatgacaagcccattcttagtaagtaactaacttagagctaaggtgtgaatcca 324
Query: 125 agtctttccatctcaaagcctatgtctttagacactgcatcctgagtctttgatacccat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agtctttccatctcaaagcctatgtctttagacactgcatcctgagtctttgatacccat 384
Query: 185 ttgtaggtgcttgcatcttgatgctttgatggtgtgctaggagaccacccaagcctcagg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttgtaggtgcttgcatcttgatgctttgatggtgtgctaggagaccacccaagcctcagg 444
Query: 245 ggaccctcctgtgccactgcctggtaga 272
||||||||||||||||||||||||||||
Sbjct: 445 ggaccctcctgtgccactgcctggtaga 472
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 272
Length of database: 672
Length adjustment: 9
Effective length of query: 263
Effective length of database: 663
Effective search space: 174369
Effective search space used: 174369
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no185_f04.g1 MSMg01no185_f04.g1 CHROMAT_FILE:
MSMg01no185_f04.g1 PHD_FILE: MSMg01no185_f04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 19:59:59 2005
(203 letters)
>mm_chr1_170098888_170099489
Length = 602
Score = 377 bits (195), Expect = e-109
Identities = 201/203 (99%), Gaps = 1/203 (0%)
Strand = Plus / Minus
Query: 1 agttcaatgtgggatcagccagttggatcatttatcccaagagttttaaaacatgtatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 336 agttcaatgtgggatcagccagttggatcatttatcccaagagttttaaaa-atgtatgt 278
Query: 61 tttgcttgacttacctagatttggctatatcagtaaacattttcttacatactataccta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 277 tttgcttgacttacctagatttggctatatcagtaaacattttcttacatactataccta 218
Query: 121 ttgctttccattatagctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgcctgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 217 ttgctttccattatagctgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtatgcctgt 158
Query: 181 gcctgtgcctggcatttatgtgt 203
|||||||||||| ||||||||||
Sbjct: 157 gcctgtgcctggtatttatgtgt 135
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 50
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 2
Number of HSP's successfully gapped: 1
Length of query: 203
Length of database: 602
Length adjustment: 8
Effective length of query: 195
Effective length of database: 594
Effective search space: 115830
Effective search space used: 115830
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
