Query= MSMg01no186_p23.b1 MSMg01no186_p23.b1 CHROMAT_FILE:
MSMg01no186_p23.b1 PHD_FILE: MSMg01no186_p23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:10 2005
(676 letters)
>mm_chr1_96361709_96362784
Length = 1076
Score = 1187 bits (614), Expect = 0.0
Identities = 658/673 (97%), Gaps = 2/673 (0%)
Strand = Plus / Plus
Query: 5 gaattctttccaagaagaccatatagtagaaaagaagcatcctggtgaggcattggagaa 64
|||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||
Sbjct: 205 gaattctttccaagaagaccatatagcagaaaagaagcatactggtgagacattggagaa 264
Query: 65 atcataggcaatgtagctagaaccttcccaaagcagcaaacagaaagtgtgaagatggtt 124
|||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 265 atcataggcaatgtagctcgaatcttcccaaagcagcaaacagaaagtgtgaagatggtt 324
Query: 125 atgaaagtcattcagagctcctctattacagagaacattcaacattttcaagaagtcctc 184
||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||
Sbjct: 325 atgaaagtcattcagagctcctctattacagagaagattcaacattttcaagaggtcctc 384
Query: 185 tttcaacttcatgccttcttcttgtgcattctcagctgaattcagcagaaagttgattac 244
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 385 tttcaacttcatgccttcttcttgtgcattctcagctgaattcagtagaaagttgattac 444
Query: 245 tagaatacatgcaatttaccagtggccacctcactgaagaaatagacactctttccttca 304
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 445 tagaatacatgcaatttaccagtggccacctcactgaagaaacagacactctttccttca 504
Query: 305 gcagccattaactaccaacagtattccaggagaaacgaactgttgctgggctcaatcttg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gcagccattaactaccaacagtattccaggagaaacgaactgttgctgggctcaatcttg 564
Query: 365 tgcagatcaccacaattgtagtaattcatgagcacaaaggtcatgctacatccaatgatg 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tgcagatcaccacaattgtagtaattcatgagcacaaaggtcatgctacatccaatgatg 624
Query: 425 tttcattttgccccacatctcttcatcctctgcatctcacattcttgctacccctttctt 484
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tttaattttgccccacatctcttcatcctctgcatctcacattcttgctacccctttctt 684
Query: 485 tttggaggaggttatataaatggtccatttaggcctgagaactccatccttatctgtccc 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tttggaggaggttatataaatggtccatttaggcctgagaactccatccttatctgtccc 744
Query: 545 cagcacttgaaccagctatgggtttctgcaatagtaagtcgcttctctgatgaagtccgg 604
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 745 cagcacttgaaccagctatgggtttctgcaatagtaagtcacttctctgatgaagtctgg 804
Query: 605 nggcatatttcttttatacccatgtcttggta-tacaagcttttatttttcattatgaat 663
|||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 805 gggcatatttcttttatacccatgtcttg-taatacaagcttttatttttcattatgaat 863
Query: 664 tcaatcataccaa 676
|||||||||||||
Sbjct: 864 tcaatcataccaa 876
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 676
Length of database: 1076
Length adjustment: 10
Effective length of query: 666
Effective length of database: 1066
Effective search space: 709956
Effective search space used: 709956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no186_p23.g1 MSMg01no186_p23.g1 CHROMAT_FILE:
MSMg01no186_p23.g1 PHD_FILE: MSMg01no186_p23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:10 2005
(289 letters)
>mm_chr1_96456468_96457156
Length = 689
Score = 551 bits (285), Expect = e-161
Identities = 288/289 (99%)
Strand = Plus / Minus
Query: 1 accttctactgaagggagaaagtcaaacatgaggacagtccgaatcagagggagaacatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 accttctactgaagggagaaagtcaaacatgaggacagtccgaatcagagggagaacatt 430
Query: 61 tttggaaaaacctgagcctgtgaactatgaaaatctaactgtccagagggatgtttcaga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 tttggaaaaacctgagcctgtgaactatgaaaatctaactgtccagagggatgtttcaga 370
Query: 121 ccacatcaaccatatcctgcacatgaccttgagctggatcaggaactttgttctcatgta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 369 ccacatcaaccatatcctgcacatgaccttgagctggatcaggaactttgttctcatgta 310
Query: 181 gattttagcattctagcctcaagttttctttctaaaagtttacaaattgccaatataatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 309 gattttagcattctagcctcaagttttctttctaaaagtttacaaattgccaatataatt 250
Query: 241 ccacattgaatttaatgatgaacagtgaactagagcaggccagataaca 289
|||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 249 ccactttgaatttaatgatgaacagtgaactagagcaggccagataaca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
