Query= MSMg01no187_g18.b1 MSMg01no187_g18.b1 CHROMAT_FILE:
MSMg01no187_g18.b1 PHD_FILE: MSMg01no187_g18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:44 2005
(311 letters)
>mm_chr1_172350551_172351261
Length = 711
Score = 594 bits (307), Expect = e-174
Identities = 307/307 (100%)
Strand = Plus / Plus
Query: 5 gaattcacttgaccctgcttgttccagtccactgaacgcagtgctcaccttggctggctg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacttgaccctgcttgttccagtccactgaacgcagtgctcaccttggctggctg 264
Query: 65 tgatgctgtctccccgccctccccaaccccccaccatgagcatcttacacacagcaatgg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tgatgctgtctccccgccctccccaaccccccaccatgagcatcttacacacagcaatgg 324
Query: 125 aaatttgggagaaagaaaattagagagaatattgttattggacacagaacagctccttac 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaatttgggagaaagaaaattagagagaatattgttattggacacagaacagctccttac 384
Query: 185 ctgcccccacaggagaactctccatcagcaagtaactcacatctgaaccattccccaaac 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctgcccccacaggagaactctccatcagcaagtaactcacatctgaaccattccccaaac 444
Query: 245 cattcccaagccctacaagtctctgggtataaaacagttggaaggagccactaatacagt 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cattcccaagccctacaagtctctgggtataaaacagttggaaggagccactaatacagt 504
Query: 305 ggttctt 311
|||||||
Sbjct: 505 ggttctt 511
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 711
Length adjustment: 9
Effective length of query: 302
Effective length of database: 702
Effective search space: 212004
Effective search space used: 212004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no187_g18.g1 MSMg01no187_g18.g1 CHROMAT_FILE:
MSMg01no187_g18.g1 PHD_FILE: MSMg01no187_g18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:02:44 2005
(518 letters)
>mm_chr1_172444483_172445400
Length = 918
Score = 857 bits (443), Expect = 0.0
Identities = 465/479 (97%), Gaps = 13/479 (2%)
Strand = Plus / Minus
Query: 49 agagtgggggcttgtaaaactacaaacaaatccaaaacagaacaaacaaaacaaaacaaa 108
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 918 agagtgggggcttgtaaaactacaaacaaatccaaaacagaacaaacaaaacaaaacaaa 859
Query: 109 acaaaaatcccagacaataacaccaaaagtgtctatttttctcttagtgcatttattttt 168
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 858 acaaaaatcccagacaataacaccaaaagtgtctatttttctcttagtgcatttattttt 799
Query: 169 ggcaaacacttttattataagagtttctttccctctccctgtcccctctccctctcccgg 228
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 798 ggcaaacacttttattataagagtttctttccctctccctgtcccctctccctctcccgg 739
Query: 229 tcccct-----cccccccccccgtgtgtgtataatttatttgctcttacagatgaagaaa 283
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 738 tcccctccccccccccccccccgtgtgtgtataatttatttgctcttacagatgaagaaa 679
Query: 284 ttgaaaggggaaaaagaaaactgctcttaccatgtcctataggcagggtcagaactctac 343
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 678 ttgaaaggggaaaaagaaaactgctcttaccatgtcctataggcagggtcagaactcta- 620
Query: 344 cccc----accctttctgattcagacgtcttcttacccaaacacagggctttgctacatt 399
| | ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 ---caaggagcctttctgattcagacgtcttcttacccaaacacagggctttgctacatt 563
Query: 400 aggagcaagatgaaaatggaagcagccatttctggttagctgcctacttattattaaaat 459
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 aggagcaagatgaaaatggaagcagccatttctggttagctgcctacttattattaaaat 503
Query: 460 ctagaaacaatttcaaaagcagatgatagcccttgggattgtaatttcctcctctgtaa 518
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ctagaaacaatttcaaaagcagatgatagcccttgggattgtaatttcctcctctgtaa 444
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 518
Length of database: 918
Length adjustment: 10
Effective length of query: 508
Effective length of database: 908
Effective search space: 461264
Effective search space used: 461264
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
