Query= MSMg01no190_p19.b1 MSMg01no190_p19.b1 CHROMAT_FILE:
MSMg01no190_p19.b1 PHD_FILE: MSMg01no190_p19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:07:25 2005
(310 letters)
>mm_chr1_161737920_161738630
Length = 711
Score = 524 bits (271), Expect = e-153
Identities = 298/307 (97%), Gaps = 2/307 (0%)
Strand = Plus / Plus
Query: 5 gaattcacttttatacagagtgagcccacagataagcaacactaggtgaaaattaataag 64
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 204 gaattcacttttatacagagtgagcccacagataaacaacactaggtgaaaattaataag 263
Query: 65 tgcaagagcaagtcatatggccttc-taggaccagagagttccaggcagaggaacccggc 123
||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||
Sbjct: 264 tgcaagagcaagtcatatggccttcttaggaccagagagttctaggcagaggaacccggc 323
Query: 124 aaatgccggggtaagagaatcacctggaaagcatcacgggatgtgagtgcatctgcacac 183
||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 324 aaacgccggggtaagagaatcacctggaaagcatcatgggatgtgagtgcatctgcacac 383
Query: 184 atgagataggagatgaagcatgaggcagtatggccaaagagatgctaaaggccaaagagc 243
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 384 atgagataggagatgaagcatgaggcagtatggctaaagagatgctaaaggccaaagagc 443
Query: 244 tggcacaagcaggctgaccacacttctcagttgt-ccaggacctcacagtaagcctgatg 302
||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 444 tggcacaagcaggctgaccacacttctcagttggaccaggacatcacagtaagcctgatg 503
Query: 303 tcttgga 309
|||||||
Sbjct: 504 tcttgga 510
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 310
Length of database: 711
Length adjustment: 9
Effective length of query: 301
Effective length of database: 702
Effective search space: 211302
Effective search space used: 211302
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no190_p19.g1 MSMg01no190_p19.g1 CHROMAT_FILE:
MSMg01no190_p19.g1 PHD_FILE: MSMg01no190_p19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:07:25 2005
(286 letters)
>mm_chr1_161883590_161884275
Length = 686
Score = 514 bits (266), Expect = e-150
Identities = 281/286 (98%)
Strand = Plus / Minus
Query: 1 agtaccttgagaagtcttcacatgggccagaccttagggttgcctttttgccatgaaccc 60
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 486 agtaccttgagaagtcttcacatggaccagaccttagggttgcctttttgccatgaaccc 427
Query: 61 ttgaatgagaccccttcctctggaaaaagcttcaagtgtgtttattacttgcaatagtag 120
||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 ttggatgaggccccttcctctggaaaaagcttcaagtgtgtttattacttgcaatagtag 367
Query: 121 atcaggggatttcccaaggctgttgttccttgactgtaaagtctagccactccgtgtatg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 atcaggggatttcccaaggctgttgttccttgactgtaaagtctagccactccgtgtatg 307
Query: 181 tatcatccaccagacagacttgggttgaggaaagccaaaatgcaggctgcttgctctgca 240
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tatcatccaccaggcagacttgggttgaggaaagccaaaatgcaggctgcttgctctgca 247
Query: 241 tgggtaatagcgctttcatctctgcaggagcttcctgtctcctgcc 286
||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 246 tgggtaatagcactttcatctctgcaggagcttcctgtctcctgcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 686
Length adjustment: 9
Effective length of query: 277
Effective length of database: 677
Effective search space: 187529
Effective search space used: 187529
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
