Query= MSMg01no191_g18.b1 MSMg01no191_g18.b1 CHROMAT_FILE:
MSMg01no191_g18.b1 PHD_FILE: MSMg01no191_g18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:08:01 2005
(316 letters)
>mm_chr1_168363636_168364354
Length = 719
Score = 586 bits (303), Expect = e-172
Identities = 311/315 (98%), Gaps = 3/315 (0%)
Strand = Plus / Minus
Query: 5 gaattcactgaactaatccattattaatggaaaatagatgccatgatgagaacaattgag 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 519 gaattcactgaactaatccattattaatggaaaatagatgccatgatgagaacaattgag 460
Query: 65 ctacaatagaatccacccatcattcattttattttcctatcccaacattgctagtaggtt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 459 ctacaatagaatccacccatcattcattttattttcctatcccaacattgctagtgggtt 400
Query: 125 tcacaatggatcacgggctt---atatcactccatagagacaaatgcttttttcactgca 181
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 399 tcacaatggatcacgggcttatgatatcactccatagagacaaatgcttttttcactgca 340
Query: 182 gacaagaacacaaccaaccaaagaactgattccacccaaggatcagtaagacagagcagc 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 339 gacaagaacacaaccaaccaaagaactgattccacccaaggatcagtaagacagagcagc 280
Query: 242 aaggaaacatgcttgctgccaagcttaaagactggagttcaatattagggagccacatag 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 279 aaggaaacatgcttgctgccaagcttaaagactggagttcaatattagggagccacatag 220
Query: 302 tagaaagagaaaatg 316
|||||||||||||||
Sbjct: 219 tagaaagagaaaatg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 719
Length adjustment: 9
Effective length of query: 307
Effective length of database: 710
Effective search space: 217970
Effective search space used: 217970
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no191_g18.g1 MSMg01no191_g18.g1 CHROMAT_FILE:
MSMg01no191_g18.g1 PHD_FILE: MSMg01no191_g18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:08:01 2005
(226 letters)
>mm_chr1_168214035_168214660
Length = 626
Score = 435 bits (225), Expect = e-127
Identities = 225/225 (100%)
Strand = Plus / Plus
Query: 1 actgtcagggtgattctcctctaagtctataatttaaagtgaactaaaatataaaagaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actgtcagggtgattctcctctaagtctataatttaaagtgaactaaaatataaaagaca 260
Query: 61 caaaaggaaaaaaataaacacaagaaatgcttaaatacatagtttataaatatatgtgaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 caaaaggaaaaaaataaacacaagaaatgcttaaatacatagtttataaatatatgtgaa 320
Query: 121 ggaaaaggaagctctatccacatttgtgacagatagtcataaactatatttattggaagc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggaaaaggaagctctatccacatttgtgacagatagtcataaactatatttattggaagc 380
Query: 181 atggttgccatgggaatatagaataaaatcaggcatgtgtgtgcc 225
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atggttgccatgggaatatagaataaaatcaggcatgtgtgtgcc 425
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 226
Length of database: 626
Length adjustment: 9
Effective length of query: 217
Effective length of database: 617
Effective search space: 133889
Effective search space used: 133889
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
