Query= MSMg01no191_h08.b1 MSMg01no191_h08.b1 CHROMAT_FILE:
MSMg01no191_h08.b1 PHD_FILE: MSMg01no191_h08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:08:04 2005
(644 letters)
>mm_chr1_35811967_35813010
Length = 1044
Score = 1178 bits (609), Expect = 0.0
Identities = 633/641 (98%), Gaps = 2/641 (0%)
Strand = Plus / Minus
Query: 5 gaattcatttaaactagtctaagacaggccatgtagctaattacctctcctttggtttga 64
|||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 844 gaattcatttaaactagtctaagacaggccatgtggctaattacctct-ctttggtttga 786
Query: 65 aagtcttcctcagagttcagtgtgaatctttcctgtgcctgactcaatcccagaagtcca 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 785 aagtcttcctcagagttcagtgtgaatctttcctgtgcctgactcaatcccagaagtcca 726
Query: 125 gtgtcccagcttctaatcttgtgtacaagagattctctctacacagagtaatcaatgcca 184
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 725 atgtcccagcttctaatcttgtgtacaagagattctctctacacagagcaatcaatgcca 666
Query: 185 ctgccctcaggttgtgtcctccattgtcagtccaagtgtctaccttatcaacataggcta 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 665 ctgccctcaggttgtgtcctccattgtcagtccaagtgtctaccttatcaacataggcta 606
Query: 245 aacaaccatccctggcatgcc-tgcaagcttgtctcgtaagtgactttaacacttaaagt 303
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 605 aacaaccatccctggcatgccttgcaagcttgtctcgtaagtgactttaacacttaaagt 546
Query: 304 tgggttaccaattaacactactcacgagagtgttcctggtctagaatatcccccacttag 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 tgggttaccaattaacactactcacgagagtgttcctggtctagaatatcccccacttag 486
Query: 364 gagcttgcattcagaaccaacaacaacctgtattccttacacattgtcctgcaacaaagt 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 gagcttgcattcagaaccaacaacaacctgtattccttacacattgtcctgcaacaaagt 426
Query: 424 caccatgtatgtacattataaaactcaccacaagtcaatgaactgcagtaggtgtggagt 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 caccatgtatgtacattataaaactcaccacaagtcaatgaactgcagtaggtgtggagt 366
Query: 484 ccctgccaatcaaaagatgtacagaagggcagatcatctgctgctgtgtagaaagccatg 543
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 ccctgccaatcaaaaaatgtacagaagggcagatcatctgctgctgtgtagaaagccatg 306
Query: 544 gaagggtccctgttgcctaagacttttccatattagactcataataattatatgttttct 603
|||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||
Sbjct: 305 gaagggtccctgttgcctaagacttttccatattagacccataataattatatgctttct 246
Query: 604 tatttaaataggaatatcaaaagccttcaaggttttataaa 644
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 tatttaaataggaatatcaaaagccttcaaggttttataaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 4
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 644
Length of database: 1044
Length adjustment: 10
Effective length of query: 634
Effective length of database: 1034
Effective search space: 655556
Effective search space used: 655556
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no191_h08.g1 MSMg01no191_h08.g1 CHROMAT_FILE:
MSMg01no191_h08.g1 PHD_FILE: MSMg01no191_h08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:08:04 2005
(273 letters)
>mm_chr1_35736746_35737418
Length = 673
Score = 489 bits (253), Expect = e-143
Identities = 268/273 (98%)
Strand = Plus / Plus
Query: 1 gggatgctaactgccacaacagacatgcaggtgaagagcctccagtcatctggagataac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gggatgctaactgccacaacagacatgcaggtgaagagcctccagtcatctggagataac 260
Query: 61 tgtactaactgctgagatggccattgctcttcaaagacagtgggcccgtcttgagcaggg 120
||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 261 tgtactaactgctgagatggccattgctcttcaaagacagtggacctgtcttgagcaggg 320
Query: 121 acaaattgtgggaaggctctgctcattctgctcattgggcgcccagtttcttctcccttc 180
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 acaaatagtgggaaggctctgctcattctgctcattgggcgcccagtttcttctcccttc 380
Query: 181 tccaacttcatccagccatctgccactcccgtgaacccttctggggaccctcattctcac 240
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 381 tccaacttcatccagccatctgccactcctgtgaacccttctggggaccctcattctcac 440
Query: 241 tgagcaatagtcaccctacaaagtgactatgaa 273
||||||||||||||||||||||| |||||||||
Sbjct: 441 tgagcaatagtcaccctacaaagagactatgaa 473
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 273
Length of database: 673
Length adjustment: 9
Effective length of query: 264
Effective length of database: 664
Effective search space: 175296
Effective search space used: 175296
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
