Query= MSMg01no192_k06.b1 MSMg01no192_k06.b1 CHROMAT_FILE:
MSMg01no192_k06.b1 PHD_FILE: MSMg01no192_k06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:10:17 2005
(424 letters)
>mm_chr1_194945285_194946108
Length = 824
Score = 772 bits (399), Expect = 0.0
Identities = 405/407 (99%)
Strand = Plus / Minus
Query: 16 gaattcaacaggattcaggggtggctgtgaatattaatgtggctcttacactttgatagc 75
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gaattcaacaggattcaggggtggctgtgaatattaatgtggctcttacactttgatagc 563
Query: 76 tggggtgacaaagtgtggacacttacttagtgtcaccaccaggacagccatccagcctct 135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tggggtgacaaagtgtggacacttacttagtgtcaccaccaggacagccatccagcctct 503
Query: 136 taaatcggggtctggcatccagggcagttacttacttctttgaccagctgattgcatttc 195
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 taaattggggtctggcatccagggcagttacttacttctttgaccagctgattgcatttc 443
Query: 196 tagtcggctacctcaaatgcgtgtgtataacatttgagactgtctatttctgtgtgtact 255
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 442 tagtcggctacctcaaatgcgtgtgtataacatttgagactgtctatctctgtgtgtact 383
Query: 256 ctagatgagagtcaggtttatgattggaatctaatggttgggctagggtcacgccagtga 315
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 ctagatgagagtcaggtttatgattggaatctaatggttgggctagggtcacgccagtga 323
Query: 316 gtctgttatttgcacaagaataatgggtagttagaaattagctctttattagccatcttc 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gtctgttatttgcacaagaataatgggtagttagaaattagctctttattagccatcttc 263
Query: 376 tgattttctgttcagcagaaactttatacatgtatttttcgatttat 422
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 tgattttctgttcagcagaaactttatacatgtatttttcgatttat 216
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 424
Length of database: 824
Length adjustment: 9
Effective length of query: 415
Effective length of database: 815
Effective search space: 338225
Effective search space used: 338225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no192_k06.g1 MSMg01no192_k06.g1 CHROMAT_FILE:
MSMg01no192_k06.g1 PHD_FILE: MSMg01no192_k06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:10:17 2005
(277 letters)
>mm_chr1_194791725_194792400
Length = 676
Score = 443 bits (229), Expect = e-129
Identities = 265/279 (94%), Gaps = 5/279 (1%)
Strand = Plus / Plus
Query: 1 ttacctgaagacaggtacccaaatacaatgagaaaatgggtaatgactatgttccctgcc 60
||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 201 ttacctggagactggtacccaaatacaatgagaaaatgggtaatgactatgttccctggc 260
Query: 61 tctatcagggactatgttcacaataactgactctatttttttt--cagttagtatagaga 118
||||||||||||| |||||||||||||||||||||||||||| ||||||||| ||| |
Sbjct: 261 actatcagggactacgttcacaataactgactctattttttttttcagttagtacagaaa 320
Query: 119 acagatcaaagtcaaagtctccaaacttaaaacaacaacaggaaaataagattgctaact 178
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 321 acagatcaaagtcaaagtctccaaacttaaaacaaca---ggaaaataagattgctaact 377
Query: 179 actcccatttgatcaatacatactgtgtctacgtatcatatcaacacattatggtacaaa 238
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 378 actcccatttgatcaatacatactgtgtccacgtatcatatcaacacattatggtacaaa 437
Query: 239 tagtccaaaatgccctatttcacacattaacaaaagtct 277
||||||||||||||||||||||||| |||||||||||||
Sbjct: 438 tagtccaaaatgccctatttcacacgttaacaaaagtct 476
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 277
Length of database: 676
Length adjustment: 9
Effective length of query: 268
Effective length of database: 667
Effective search space: 178756
Effective search space used: 178756
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
