This page provides previous versions of nucleotide polymorphisms of MSM/Ms and JF1/Ms strains, corresponding to GRCm38 coordinate by Liftover from GRCm37.
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RIKEN MSM/Ms Mouse BAC clones & Library
BAC clone ordering.
BAC Information
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Search Result
BAC
Clone Name
MSMg01-192O10
Chromosome
1 (Build37)
Map Location
3,092,473 - 3,092,853
singlet/doublet
singlet
Overlap gene
none
Upstream gene
none
Downstream gene
Xkr4
,
LOC100038975
,
LOC664792
Link
Open Mouse BAC browser
Click to get alignment info.
name
Xkr4
(CDS detail)
type
gene
link
vega
ensembl
MGI
xref
GeneID:497097
MGI:3528744
definition
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
name
LOC100038975
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:100038975
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST
name
LOC664792
(CDS detail)
type
gene
link
vega
ensembl
xref
GeneID:664792
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins
pseudo
: _no_value
name
Xkr4
(CDS detail)
type
mRNA
link
vega
ensembl
MGI
NCBI
xref
GI:59858538
GeneID:497097
MGI:3528744
definition
exception
: unclassified transcription discrepancy
note
: Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA
product
: X Kell blood group precursor related family member 4
transcript_id
: NM_001011874.1
name
LOC100038975
(CDS detail)
type
mRNA
link
vega
ensembl
NCBI
xref
GI:149233582
GeneID:100038975
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST
product
: hypothetical protein LOC100038975
transcript_id
: XM_001472020.1
name
Xkr4
(CDS detail)
type
CDS
link
vega
ensembl
MGI
NCBI
xref
GI:59858539
CCDS:CCDS14803.1
GeneID:497097
MGI:3528744
definition
GO_component
: GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]
codon_start
: 1
product
: XK-related protein 4
protein_id
: NP_001011874.1
name
LOC100038975
(CDS detail)
type
CDS
link
vega
ensembl
NCBI
xref
GI:149233583
GeneID:100038975
definition
codon_start
: 1
product
: hypothetical protein
protein_id
: XP_001472070.1
name
(CDS detail)
type
STS
link
xref
UniSTS:128840
definition
standard_name
: D1Mit475
name
(CDS detail)
type
STS
link
xref
UniSTS:125374
definition
standard_name
: MHAa84a2.seq
name
LOC664792
(CDS detail)
type
misc_RNA
link
vega
ensembl
NCBI
xref
GI:149233581
GeneID:664792
definition
note
: Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 2 Proteins
product
: similar to Solute carrier family 35, member E3
pseudo
: _no_value
transcript_id
: XR_030515.1
clone name
MSMg01-147H05
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-389J19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-354D11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-192O10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-427A09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-466J16
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-293D22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-198H12
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-199I16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-487J11
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-301C01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-544N17
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-378O02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-345B19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-546C18
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-412K08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-513O20
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-521C13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-191H01
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-521A17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-408D20
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-522J22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-346H06
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-260M08
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-367K10
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-103B17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-103A07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-108G16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-316G02
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-432C07
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-129G01
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-101B16
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-098N17
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-441I13
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-133K23
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-108G09
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-105M15
singlet/doublet
singlet
plural/unique
plural
clone name
MSMg01-300N22
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-447I19
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-447I21
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-548C10
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-372A13
singlet/doublet
singlet
plural/unique
unique
clone name
MSMg01-410I22
singlet/doublet
doublet
plural/unique
unique
clone name
MSMg01-521O16
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-191O15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-285A04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-100K21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-203D22
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-024I07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-026M10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-067K19
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-099I09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-158L04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-185N02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-319G15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-025M06
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-296H18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-186C05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-106B02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-202I10
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-260D03
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-260O07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-082N01
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-236L21
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-101E15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-174K04
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-264L06
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-213L07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-161P22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-008B08
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-324C12
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-017C09
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-029L23
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-285O20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-226G09
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-267E18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-236B20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-045L11
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-295L08
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-210C19
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-310M05
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-133A07
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-257L11
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-134F22
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-281K07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-241N18
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-341O04
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-086L24
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-008I17
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-041G20
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-076B05
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-087G15
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-042E10
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-097F02
singlet/doublet
doublet
plural/unique
unique
clone name
B6Ng01-056M07
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-246O12
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-268H03
singlet/doublet
singlet
plural/unique
unique
clone name
B6Ng01-042F17
singlet/doublet
singlet
plural/unique
unique