Query= MSMg01no194_d14.b1 MSMg01no194_d14.b1 CHROMAT_FILE:
MSMg01no194_d14.b1 PHD_FILE: MSMg01no194_d14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:13:02 2005
(663 letters)
>mm_chr1_182177159_182178221
Length = 1063
Score = 1193 bits (617), Expect = 0.0
Identities = 649/661 (98%), Gaps = 4/661 (0%)
Strand = Plus / Minus
Query: 5 gaattcactgttgctgc--aagggatactgaagagaccttgggtctagtgggtgtgtgtt 62
|||||||||||||| | ||| ||||| ||||||| || ||||||||||||||||||||
Sbjct: 863 gaattcactgttgc--cagaagagatacggaagagatctcgggtctagtgggtgtgtgtt 806
Query: 63 taagatatgacagacagccagttctcaaagaggaaggggaccttacagtcttgcagaccc 122
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 805 taagatatgacagacagccagttctcaaagaggaaggggaccttatagtcttgcagaccc 746
Query: 123 ctgcttggcaagaattcccccatatgtcagggcaaggtgacctttgaagctatgtcccct 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ctgcttggcaagaattcccccatatgtcagggcaaggtgacctttgaagctatgtcccct 686
Query: 183 taagctgagttctcttgtagagactcttggttccaaagctctagggcacagaacaccttc 242
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 taagctgagttctcttgtagagactcttggttccaaagctctagggcacagaacaccttc 626
Query: 243 tgagcacagggcttagctcagcttccagaatgccaagtatgagggcagtggacccagcat 302
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 tgagcacagggcttagctcagcttccagaatgccaagtatgagggcagtggacccagcat 566
Query: 303 ctaggccatgctctgctgtgtgtggcctccataagaggacatttctcttctgccctccta 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ctaggccatgctctgctgtgtgtggcctccataagaggacatttctcttctgccctccta 506
Query: 363 ggagatacctaggctgaattacactcccttccccttggccagatgctcagaccctttccc 422
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ggagatacctaggctgaattacactcccttccccttggccagatgctcagaccctttccc 446
Query: 423 gggatggcctaccctagtaggtcccctgatctcaccatcatattgagacaacatggtgtt 482
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 gggatggcctaccctagcaggtcccctgatctcaccatcatattgagacaacatggtgtt 386
Query: 483 gtgtacccatcctgttcataatacttgaatagttacatctttccagaatgttctgtctct 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gtgtacccatcctgttcataatacttgaatagttacatctttccagaatgttctgtctct 326
Query: 543 gtctgtcacagctcatatacctttttggcccatgccctgtccttctcagccctcaagacc 602
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 325 gtctgtcacagctcatatacctttctggcccatgccctgtccttctcagccctcaagacc 266
Query: 603 caagagacggagcgcctggtcctctccacctcgctcttgtgcctgtggtattctgcagct 662
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 265 caagagacggagcgcctggtcctctccacctccctcttgtgcctgtggtattctgcagct 206
Query: 663 g 663
|
Sbjct: 205 g 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 663
Length of database: 1063
Length adjustment: 10
Effective length of query: 653
Effective length of database: 1053
Effective search space: 687609
Effective search space used: 687609
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no194_d14.g1 MSMg01no194_d14.g1 CHROMAT_FILE:
MSMg01no194_d14.g1 PHD_FILE: MSMg01no194_d14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:13:02 2005
(287 letters)
>mm_chr1_182044134_182044822
Length = 689
Score = 514 bits (266), Expect = e-150
Identities = 282/288 (97%), Gaps = 2/288 (0%)
Strand = Plus / Plus
Query: 1 tatacgttagcaaccacacatgtgcacacccttgagagttcatacacacacgcacacaca 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 tatacgttagcaaccacacatgtgcacacccttgagagttcatacacacatgcacacaca 260
Query: 61 ctc--atgcgtatagacacgtgcatagactggctgagatattaggtattagttaatatac 118
||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctcaaatgcgtatatacacgtgcatagactggctgagatattaggtattagttaatatac 320
Query: 119 attatattaagaattttaaattacagaaatgactgctttgccatgaatttgactgtcttt 178
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 321 attatattaagaattttaaattacagaaatgactgctttgccatgaatttgactgttttt 380
Query: 179 tcagtgttaaaatatacttcatgagtaacttttgagttgggataaaagtattttgtgatg 238
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tcagtgttaaaatatacttcatgagtaacttttgagttgggataaaagtattttgtgatg 440
Query: 239 tatttataatgttctcacatgtcatatgaggtagacacttcaacagtg 286
|||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 441 tatttataatgttctcacatatcatatgaggtagacacttcaacagtg 488
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 689
Length adjustment: 9
Effective length of query: 278
Effective length of database: 680
Effective search space: 189040
Effective search space used: 189040
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|