TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGA
ATTCCAGACCCATTCCCAAACAAAGTAAAAGCAATATACAGCAAACCATT
AGGCAGCATCAAACTAAATATAGAGAAACCTGATGCAATCCCACTAAAAT
CAGGGACTAGACAAGGCTGCCCACTCTCTCCCTACCTATTCAATATAGTA
CTCCAAGTCCTACCCAGAGAAGTTAGACAACAAAAGGAAGACAATGGGAT
ACAAATTGGACAGGAAGAAATCAAACTATCACTATTTGCAAATGGTATGA
TAGTGTGCTTAAGTGATCCCAAAAATTCCACTAGAGAACTTCTAAACCTG
ATAAACAACTTCAGCAAATTGGCTGGATATAAAATTAACTCAAACAAATC
AGTGGCCTTCCTCTATGCAAAGGATAAACAGGCTGAGAAAGAAATTAGGG
AACAACACCCTTCATAGTAGTCACAAATAATATAAAATACCTTGGTGTGA
CTATCTAAGCAAGTGAAAGATTTGTATGACAAGAACTTCAAGTCTCTGAA
GAAAGTAATCAAAGAAGATCTCAGAAGATGGAAAGATCTCCCATGCTCAC
TGATTGGCATAATTAATATAGTAAAAGTTGGCCATCTTGTCGAAAGCAAT
CTACAGATTCAATGCAATCTCCCCATCAAAATTCCAACCCAATTCTTCAT
AGAGTTAGGAAGAATATTTCTCATATTCATCTGG

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXCAGTCTACATTCTTTACCTCTGAA
TCATCTTTCCAGTCTCAGCAATAACAGCTTTTTAAAGAATTTCCCAAAGT
AAGTAAGCCATCAAGTCTTCCAAATACTCTAAAGTTTCTCTCTGAAGTTA
GTTAGCCCACCAGCGCTGACTCCAAGGCCAGCTTGTGTTCTTCTCCTAAG
TGCTTGCTCTCTGATCCACTCATCTCACATGTATTCAGCACATAGGTGAA
GAGCTCCTCTCATAGCTCTGCAAGGCTAGGCTAAGAAATTTTTCCAAATT
GTGCGTTGCCAGTGATTTAAGGAACATAAAAAAAATAAAAAAATAAAAAC
CAACCCAACAAAAACCGGCAGGTAGACCAGTGGAACAGAACCAAGGTCTC
AGAAATAAATCTTCATACCTGCAGCCACCTAATTTTCAACAAAGTATCAA
AAACATACATTGGGTGGGGAGAGCCTCTTCCTTCAACAGGGATGGGAAAC
CTGGATATCCATATGTAAATGGGTGTAGCTAGAGCCTAAGCTTTCACACT
ACAGAAAAGTCCATTTAAAATAGATCAAAGACCTTCAGGTAGGTCCTGAA
ACTCTGAAGAGGAATGTAAATTAGGGGGCCACAATATGAAGGCTCCTCAC
AAAATAAACCGAAGTGCCATATGATCTAGTTATTTGACTGCN

Query= MSMg01no194_k19.g1 MSMg01no194_k19.g1 CHROMAT_FILE:
MSMg01no194_k19.g1 PHD_FILE: MSMg01no194_k19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:13:37 2005
         (664 letters)



>mm_chr1_107264133_107265196
          Length = 1064

 Score = 1102 bits (570), Expect = 0.0
 Identities = 637/664 (95%), Gaps = 9/664 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   cagtctacattctttacctctgaatcatctttccagtctcagcaataacagctttttaaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cagtctacattctttacctctgaatcatctttccagtctcagcaataacagctttttaaa 260

                                                                       
Query: 61  gaatttcccaaagtaagtaagccatcaagtcttccaaatactctaaagtttctctctgaa 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaatttcccaaagtaagtaagccatcaagtcttccaaatactctaaagtttctctctgaa 320

                                                                       
Query: 121 gttagttagcccaccagcgctgactccaaggccagcttgtgttcttctcctaagtgcttg 180
           ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gttagttagcccaccagagctgactccaaggccagcttgtgttcttctcctaagtgcttg 380

                                                                       
Query: 181 ctctctgatccactcatctcacatgtattcagcacataggtgaagagctcctctcatagc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctctctgatccactcatctcacatgtattcagcacataggtgaagagctcctctcatagc 440

                                                                       
Query: 241 tctgcaaggctaggctaagaaatttttccaaattgtgcgttgccagtgatttaaggaaca 300
           ||||||||||||||||||| |  ||||||||||||| | |||||||||||||||||||  
Sbjct: 441 tctgcaaggctaggctaagcagcttttccaaattgttcattgccagtgatttaaggaa-- 498

                                                                       
Query: 301 taaaaaaaataaaaaaataaaaaccaacccaacaaaaaccggcaggtagaccagtggaac 360
           ||       ||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 499 ta-------taaaaaaataaaaaccaacccaacaaaaaccagcaggtagaccagtggaac 551

                                                                       
Query: 361 agaaccaaggtctcagaaataaatcttcatacctgcagccacctaattttcaacaaagta 420
           |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 552 agaaccaaggcctcagaaataaatcttcatacctgtagccacctaattttcaacaaagta 611

                                                                       
Query: 421 tcaaaaacatacattgggtggggagagcctcttccttcaacagggatgggaaacctggat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 612 tcaaaaacatacattgggtggggagagcctcttccttcaacagggatgggaaacctggat 671

                                                                       
Query: 481 atccatatgtaaatgggtgtagctagagcctaagctttcacactacagaaaagtccattt 540
           |||||||||||| |||||| |||||||||| |||||||||||||||||||||||||||||
Sbjct: 672 atccatatgtaagtgggtgaagctagagcccaagctttcacactacagaaaagtccattt 731

                                                                       
Query: 541 aaaatagatcaaagaccttcaggtaggtcctgaaactctgaagaggaatgtaaattaggg 600
           |||| | |||||||||||||||||| ||||||||||||||| ||||| ||||||||||||
Sbjct: 732 aaaaaaaatcaaagaccttcaggtaagtcctgaaactctgaggaggagtgtaaattaggg 791

                                                                       
Query: 601 ggccacaatatgaaggctcctcacaaaataaaccgaagtgccatatgatctagttatttg 660
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 792 ggccacaatatgaaggctcctcacaaaataaaccaaagtgccatatgatctagttatttg 851

               
Query: 661 actg 664
           ||||
Sbjct: 852 actg 855


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 664
Length of database: 1064
Length adjustment: 10
Effective length of query: 654
Effective length of database: 1054
Effective search space:   689316
Effective search space used:   689316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)