XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCA
TATCCTGCACAATTATTAGTGTCAAGATCTATAGCTGGCTATGAAACAGG
CCCCAAGGAAAAATCTAATATTTTATTTTGTTAAAATAACATAAACATGG
TATTAAACATTAGGACTAGATGTTATATGTATACATTAGTATATCTCTCA
AACCTCACCAAAGAAACTTCATCTTTCAGTAGATGATGATTAACAAAGAG
ATCCACACCTGGCAACATGCAGAGAACAAAAGACCTTGTATGTATGTTCA
TCCCTAAATGGGGTAACTATATCACCACCCTCTTCTCTGCTCCCAAGATT
CTGGCATCATCTCAGAATGTGGGTCAGAAAGATAGTAAGATCCATAGGCA
TAGGAAGAATGTAGCATAACAGTATGTGTGGGTCACAACAGGGATGGTGC
ACATTTGAGGTAACATTATCACTCAATTCCTACACAAGTTCAAGCTGGCA
AAACTCCCAGCATGACTCAGGGAGTGGGAACAAAACTATATCACTTAGGA
CCTATTAGCAATTGCTGGCTGCCAGGAGAGGGAAAGTCATTTTTCTTTAG
GTATTTAACCCTTGAAAGCCTTCCTACTACACAGTGAACATTCCTATACC
CAGTAAGTAACGTACCAGCTGAGCCATCTTCCCAGAGGTCACGGTGCTTG
CTGCCAAATCTGATGACTTGAGTTTGATCCCTGGAACTCACATAG

CTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXCATGGTCTTTGAGTTGCTAGAAGAAAATAT
CAAAACATCTATTAAATATTTGAAAAATTAAGATTAAAAATGCCTGAGTA
TAAATGATGAAGAAGTTTTTGGCTGTTAGAGTGACACAGAACTGTCATTT
GATATGAAGGAGGGACAGAAATCAGGAAGTTGTGGAAACAGACTCCCAAC
ATAATGATGATAAGGAATTGGGAAGATGGACCTCTTTGTAAAGGAGAACA
GAGTCACTGGTCAATACTTTCACATGACTCAGCAGTGAGTATCTGCCACT
CTATTTAACACTTCTTTCTCTTACATGCCAATTCACATTTACTCATTTCC
AAATGATTTCATTTTTAGAAAATCAGGAAGGGTCTCGGAATACAGCTTAG
CAGGTAGAGAATGAAGACTTGGGGTATAAATATAAATGTAGAAATAAATT
TATCTAAAAGCATATCTGTAATATCTGTAAACAACAGGGCTTCTGTAGGG
ACATCATTGCAATGCTCAGGTGGCACACACTGGGAAATATTTATAAAATA
CTCAAAATTTTTTCATAAATTTAAAGTGAATGAGTCTTGCATAAAGCTAA
TTTTCTATTATTTCAAGTGTTTGCAAAATTATTATAATAAATTTACTTAA
TAAAATATGCAAAGGAAATTAAATAACACAGCACATGTTAAATGGGTN

Query= MSMg01no195_n17.g1 MSMg01no195_n17.g1 CHROMAT_FILE:
MSMg01no195_n17.g1 PHD_FILE: MSMg01no195_n17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:15:12 2005
         (596 letters)



>mm_chr1_101584721_101585719
          Length = 999

 Score = 1013 bits (524), Expect = 0.0
 Identities = 581/600 (96%), Gaps = 5/600 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   catggtctttgagttgctagaagaaaatatcaaaacatctattaaa-tatttgaaaaatt 59
           ||||||||||||||||||||||||||||||||||| | |||||||| |||||||||||||
Sbjct: 201 catggtctttgagttgctagaagaaaatatcaaaagagctattaaaatatttgaaaaatt 260

                                                                       
Query: 60  aagattaaaaatgcctga-gtataaatga-tgaagaagtttttggctgttagagtgacac 117
           |||||||| |||| || | |||||||||| ||||||||||||||||||||||||||||||
Sbjct: 261 aagattaataatgtcttaagtataaatgagtgaagaagtttttggctgttagagtgacac 320

                                                                       
Query: 118 agaactgtcatttgatatgaaggagggacagaaatcaggaagttgtggaaacagactccc 177
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 321 agaactgtcatttgatatgaaggagggacagaaaccaggaagttgtggaaacagactccc 380

                                                                       
Query: 178 aacataatgatgataaggaattgggaagatggacctctttgtaaaggagaacagagtcac 237
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aacataatgatgataaggaattgggaagatggacctctttgtaaaggagaacagagtcac 440

                                                                       
Query: 238 tggtcaatactttcacatgactcagcagtgagtatctgcca-ctctatttaacacttctt 296
           ||||||||||||||||||||||||||||||||||||||| | |||||||||||||| |||
Sbjct: 441 tggtcaatactttcacatgactcagcagtgagtatctgc-agctctatttaacactcctt 499

                                                                       
Query: 297 tctcttacatgccaattcacatttactcatttccaaatgatttcatttttagaaaatcag 356
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 500 tctcttacatgccaattcacatttactcatttccaaatgatttcatttttagaaaatcag 559

                                                                       
Query: 357 gaagggtctcggaatacagcttagcaggtagagaatgaagacttggggtataaatataaa 416
           ||||||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||
Sbjct: 560 gaagggtctaggaatacagcttagcaggtagagaatgaagacttgggatatagatataaa 619

                                                                       
Query: 417 tgtagaaataaatttatctaaaagcatatctgtaatatctgtaaacaacagggcttctgt 476
           |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 620 tgtagacataaatttatctaaaagcatatctgtaacatctgtaaacaacagggcttctgt 679

                                                                       
Query: 477 agggacatcattgcaatgctcaggtggcacacactgggaaatatttataaaatactcaaa 536
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 680 agggacatcattgcaatgctcaggtggcacacactgggaaatatttataaaattctcaaa 739

                                                                       
Query: 537 attttttcataaatttaaagtgaatgagtcttgcataaagctaattttctattatttcaa 596
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 740 atgttttcataaatttaaagtgaatgagtcttgcataaagctaattttctattatttcaa 799


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 596
Length of database: 999
Length adjustment: 10
Effective length of query: 586
Effective length of database: 989
Effective search space:   579554
Effective search space used:   579554
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)