NTTGCGNNGACGGGGGGGNGAAGAAANCAAACANNCACAGAAAGNCNACA
GGGCNTGTTTGACANAAAAAGAGGNGGGGNACCCAGGGAACGGNCANCNA
CACACAAACCCACACCCAGAGACGGACCCAGGCACAAGCAGCGAGAAACC
GGACACACGCAGCGCAAGCAAGCCAGACCCCCACGACAGACAATTTCTAG
GCAGGAATCTGAACCAAAAGGAAGATCGGACACAGTCCCGATGCGAGCAA
CCCGACACCATTAATGTCCTACACAACAACAAACACCCAAGAAGAAAAGA
AGAAACCCCCCCCCACGCCAGAGNNGAAGAGAAGACNAACNCCAGCNCAG
GGGCCCCCCCAACACCAAGGCCGCAGCAGGCACCCGAACGCACGCGCACA
CACACCCACCCAGACACACAAACAAACACAACAAAAAACAACAGAACCGC
GCCAACACGGCCCCACAAGGCAAAAGGCCAACAACCAGGAAGCGAGGCNC
ACACGCAAGAGCCACCGACGACACNGACGAACACGGCAAGACCAAGCCNA
GGGCACACCCCCGACCAAAAAGGCAACGGCACACCCAAAGACCCAAGAGA
GTCTGATAACACGCACCCACCAAAGACCCGCTCGCCACCCCGTGAAACTC
CCCCCCCCCAAGACACCAG

CGATGACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTGTGCTGGCTCGGTACATGACTAA
AATGTCTATGAGAAAGGTTATTGCTTCCACAGGGAAGATGAAGGGTGAAA
TTGCTAACTATTATTAACATTCATCGACTTATTCAACAATTTGGGGGCGT
TTAATGCATGTCAGAGTCGGTAACTCCAACAGTGAATGAATCAGAATCAC
CTGATGATCTCACGCAGACACTGAATTCTTTAGTGTCATTTGGACCACTG
AATTGTCTAGTGTGCTTTGGACCTCCTAGGTCTTGAGAGTCAAGTGAAAG
GCTTAGAGTGTTATTGTCATTTTTCTAAGAATGGAACTGGTTTTGTTCAC
AAATGCAATAGAGTTAACACCCGCCAGAGCTAGCACTAGACCCTAAGTTC
AAGGCTTTGAGAAATAGAACCAAAGTAATGTAACCAAAGTAGTTCCCACG
GAACACTTCAAGGCTTTAAAGTGATGGAATTTCATTCACAATATGTAAAA
CCTGGAAATAACCTGAATATCCAACAATAGAATAAGCTAATATTTATTAC
TCATGTGATAAACACTATGCATTCTTAGAAATGATTGAATTGCAGTCATA
TGCAATGCAAGGGAAACATAAAAGAATGTGCATTGTATATCCATTTATAC
CAAGTTTAAGGACGTGTAACACCAATAATGGTGATA

Query= MSMg01no205_j24.g1 MSMg01no205_j24.g1 CHROMAT_FILE:
MSMg01no205_j24.g1 PHD_FILE: MSMg01no205_j24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:27:32 2005
         (586 letters)



>mm_chr1_76640660_76641645
          Length = 986

 Score = 1064 bits (550), Expect = 0.0
 Identities = 577/586 (98%)
 Strand = Plus / Minus

                                                                       
Query: 1   tgtgctggctcggtacatgactaaaatgtctatgagaaaggttattgcttccacagggaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||
Sbjct: 786 tgtgctggctcggtacatgactaaaatgtctatgagaaaggttattgcttagacaaggaa 727

                                                                       
Query: 61  gatgaagggtgaaattgctaactattattaacattcatcgacttattcaacaatttgggg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 726 gatgaagggtgaaattgctaactattattaacattcatcgacttattcaacaatttgggg 667

                                                                       
Query: 121 gcgtttaatgcatgtcagagtcggtaactccaacagtgaatgaatcagaatcacctgatg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 666 gcgtttaatgcatgtcagagtcggtaactccaacagtgaatgaatcagaatcacctgatg 607

                                                                       
Query: 181 atctcacgcagacactgaattctttagtgtcatttggaccactgaattgtctagtgtgct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 606 atctcacgcagacactgaattctttagtgtcatttggaccactgaattgtctagtgtgct 547

                                                                       
Query: 241 ttggacctcctaggtcttgagagtcaagtgaaaggcttagagtgttattgtcatttttct 300
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 546 ttggacctcctaggtcttgagagtcaagtgaaaggcttacagtgttattgtcatttttct 487

                                                                       
Query: 301 aagaatggaactggttttgttcacaaatgcaatagagttaacacccgccagagctagcac 360
           ||||||||||||||||||||||||||||||||||||||||| | | | ||||||||||||
Sbjct: 486 aagaatggaactggttttgttcacaaatgcaatagagttaataactgtcagagctagcac 427

                                                                       
Query: 361 tagaccctaagttcaaggctttgagaaatagaaccaaagtaatgtaaccaaagtagttcc 420
           ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 426 tagacccaaagttcaaggctttgagaaatagaaccaaagtaatgtaaccaaagtagttcc 367

                                                                       
Query: 421 cacggaacacttcaaggctttaaagtgatggaatttcattcacaatatgtaaaacctgga 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 cacggaacacttcaaggctttaaagtgatggaatttcattcacaatatgtaaaacctgga 307

                                                                       
Query: 481 aataacctgaatatccaacaatagaataagctaatatttattactcatgtgataaacact 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 aataacctgaatatccaacaatagaataagctaatatttattactcatgtgataaacact 247

                                                         
Query: 541 atgcattcttagaaatgattgaattgcagtcatatgcaatgcaagg 586
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 atgcattcttagaaatgattgaattgcagtcatatgcaatgcaagg 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 586
Length of database: 986
Length adjustment: 10
Effective length of query: 576
Effective length of database: 976
Effective search space:   562176
Effective search space used:   562176
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)