Query= MSMg01no207_a16.b1 MSMg01no207_a16.b1 CHROMAT_FILE:
MSMg01no207_a16.b1 PHD_FILE: MSMg01no207_a16.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:29:27 2005
(339 letters)
>mm_chr1_160524705_160525442
Length = 738
Score = 600 bits (310), Expect = e-176
Identities = 331/340 (97%), Gaps = 7/340 (2%)
Strand = Plus / Minus
Query: 1 accacctgatgcccagaatctcttaaaagatttggagagaagagaaccttcactgtcttg 60
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 371 accacctgatgtccagaatctcttaaaagatttggagagaagagaaccttcactgtcttg 312
Query: 61 tcca--ctcttggatacatatatgtatg-aaaaaaatatatatttttttcttataagtaa 117
|||| ||||||||||||||||||| |||||||||||| ||||||||||||||||||
Sbjct: 311 tccaag---ttggatacatatatgtatgaaaaaaaatatat-tttttttcttataagtaa 256
Query: 118 agctaaaaataataaccgcagctatcacgaattaggcaattctttttgtagactattttt 177
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 255 agctaaaaataataaccgcagctatcacgaattaggcaattcttttcgtagactattttt 196
Query: 178 atctattgtatttatgtagtcccaacaacacagatactttatcctctcaattttgtaggt 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 atctattgtatttatgtagtcccaacaacacagatactttatcctctcaattttgtaggt 136
Query: 238 ggcttagaaaaacaaagaaacttgtttaaggtcaccattggtagaaaatgatagaaccgc 297
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 ggcttagaaaaacaaagaaacttgtttaaggtcaccattggtagaaaatgatagaaccgc 76
Query: 298 actttgggcctagatctgtctgactccaatgcttgtgtgt 337
||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 actttgggcctagatctgtctgactccaatgcttgtgtgt 36
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 339
Length of database: 738
Length adjustment: 9
Effective length of query: 330
Effective length of database: 729
Effective search space: 240570
Effective search space used: 240570
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no207_a16.g1 MSMg01no207_a16.g1 CHROMAT_FILE:
MSMg01no207_a16.g1 PHD_FILE: MSMg01no207_a16.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:29:27 2005
(337 letters)
>mm_chr1_160372528_160373264
Length = 737
Score = 629 bits (325), Expect = 0.0
Identities = 334/337 (99%)
Strand = Plus / Plus
Query: 1 agtcagcatcccaggtacggacactggcttcaggtcccaagagcgctgctgaaagatgag 60
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtcagcatctcaggtacggacactggcttcaggtcccaagagcgctgctgaaagatgag 260
Query: 61 ttcctcctgtagttgtgtctgctgagcaactggctagggagtgtgagaatggaggatttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcctcctgtagttgtgtctgctgagcaactggctagggagtgtgagaatggaggatttt 320
Query: 121 tgtttcagtgtggtagcacagggaggataatgtctatgtaaatcacttctccatcctgag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tgtttcagtgtggtagcacagggaggataatgtctatgtaaatcacttctccatcctgag 380
Query: 181 ttcttcatgaacaatggtactagactaagtaaaggtctttacatattatattagtcaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcttcatgaacaatggtactagactaagtaaaggtctttacatattatattagtcaaaa 440
Query: 241 ttatgcatcatattttcaccactctggccaaatatgtaataagaatctatttatggagga 300
||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||
Sbjct: 441 ttatgcatcatattttcaccactctggccaaatatgtaataagaagcaatttatggagga 500
Query: 301 agggtttatgttgggttggaggctcatgatggagaga 337
|||||||||||||||||||||||||||||||||||||
Sbjct: 501 agggtttatgttgggttggaggctcatgatggagaga 537
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 737
Length adjustment: 9
Effective length of query: 328
Effective length of database: 728
Effective search space: 238784
Effective search space used: 238784
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
