Query= MSMg01no209_f02.b1 MSMg01no209_f02.b1 CHROMAT_FILE:
MSMg01no209_f02.b1 PHD_FILE: MSMg01no209_f02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:33:25 2005
(371 letters)
>mm_chr1_125677000_125677771
Length = 772
Score = 671 bits (347), Expect = 0.0
Identities = 362/367 (98%), Gaps = 1/367 (0%)
Strand = Plus / Plus
Query: 5 gaattcaactacctgcctgaaagttagtgccactctattcctgtggagatagaacaaagg 64
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaactacctggctgaaagttagtgccactctattcctgtggagatagaacaaagg 264
Query: 65 ctacattacttaaccccctgctgttaggctacaggtattaatcacctaaactagtggctt 124
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ctacattacttaatcccctgctgttaggctacaggtattaatcacctaaactagtggctt 324
Query: 125 ttaacactcagaatgagcaggaatggttttaggactttttagaagttatcataagcattc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttaacactcagaatgagcaggaatggttttaggactttttagaagttatcataagcattc 384
Query: 185 agtaaagttagagagctagaacatcaggagaccatcaatctttaaagtcacacaggagtc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agtaaagttagagagctagaacatcaggagaccatcaatctttaaagtcacacaggagtc 444
Query: 245 ctactctgtgtcttattccaacctgctccaggccaggaggctcctggcatatatccagtc 304
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 ctactctgtgtcttgttccaacctgctccaggccaggaggctcctggcatatatccagtc 504
Query: 305 tcccacatcttataaaattccctccaagattttgttatttt-gtacatttcattatttca 363
|||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 505 tcccacatcttacaaaattccctccaagattttgttatttttgtacatttcattatttca 564
Query: 364 gattaac 370
|||||||
Sbjct: 565 gattaac 571
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 772
Length adjustment: 9
Effective length of query: 362
Effective length of database: 763
Effective search space: 276206
Effective search space used: 276206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no209_f02.g1 MSMg01no209_f02.g1 CHROMAT_FILE:
MSMg01no209_f02.g1 PHD_FILE: MSMg01no209_f02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:33:25 2005
(287 letters)
>mm_chr1_125813807_125814493
Length = 687
Score = 509 bits (263), Expect = e-148
Identities = 278/283 (98%)
Strand = Plus / Minus
Query: 1 tggctactctattcacagagaatgggaaaataagaaggctctcttccatccatgaattga 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 483 tggctactctattcacagagaatgggaaaataagaaggctctcttccatctatgaattga 424
Query: 61 aacattgactggctttgagggcacaccttgcctgacttcacacacaaagcattttagcta 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 423 aacattgactggctttgagggcactccttgcctgacttcacacacaaagcattttagcta 364
Query: 121 gagacacactcttctaaccagagtaaacatgatccgtgctgcatacttacaagagaattt 180
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gagacacactcttctagccagagtaaacatgatccgtgctgcatacttacaagagaattt 304
Query: 181 gaaactcgccttgcgtttatttaatttttcctggtccatggaatttctgaaaatagacaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 303 gaaactcgccttgcgtttatttaatttttcctggtccatggaatttctgaaaatagaaaa 244
Query: 241 ctattttattctaaatttaaataaaggtctctgtaatcttctg 283
||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 243 ctattttattctagatttaaataaaggtctctgtaatcttctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 287
Length of database: 687
Length adjustment: 9
Effective length of query: 278
Effective length of database: 678
Effective search space: 188484
Effective search space used: 188484
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
