Query= MSMg01no210_l10.b1 MSMg01no210_l10.b1 CHROMAT_FILE:
MSMg01no210_l10.b1 PHD_FILE: MSMg01no210_l10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:35:22 2005
(273 letters)
>mm_chr1_130315323_130315995
Length = 673
Score = 495 bits (256), Expect = e-144
Identities = 265/268 (98%)
Strand = Plus / Minus
Query: 5 gaattcctagactagagcatggagcctttgtgtaaacaaaggttttactgggtagggaac 64
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 472 gaattcctagtctagagcatggagcctttgtgtaaacaaaggttttactgggtagggaac 413
Query: 65 taaagcattttcataagtcttgtaaggaaagggagataaacagatttgaattcctggttt 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 412 taaagcattttcataagtcttgtaaggaaagggagataaacagatttgaattcctggttt 353
Query: 125 taaacacaagttttacagtattcgatagaaaaagtcatagttgatatttcttacacatat 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 352 taaacacaagttttacagtattcgatagaaaaagtcatagttgatatttcttacacatat 293
Query: 185 ttacattgttactccaaagttatgacctaaataagaatactctatcaaagcaaaggagca 244
|||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 292 ttacatcgttactccaaagttatgacctaaataagaatattctatcaaagcaaaggagca 233
Query: 245 cagtaagacatatgcaggaaaacaacaa 272
||||||||||||||||||||||||||||
Sbjct: 232 cagtaagacatatgcaggaaaacaacaa 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 273
Length of database: 673
Length adjustment: 9
Effective length of query: 264
Effective length of database: 664
Effective search space: 175296
Effective search space used: 175296
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no210_l10.g1 MSMg01no210_l10.g1 CHROMAT_FILE:
MSMg01no210_l10.g1 PHD_FILE: MSMg01no210_l10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:35:22 2005
(283 letters)
>mm_chr1_130166263_130166946
Length = 684
Score = 476 bits (246), Expect = e-139
Identities = 273/282 (96%), Gaps = 1/282 (0%)
Strand = Plus / Plus
Query: 1 agttccggctgcctgatggttcttcccttac-aaccagtttccttctgacgctcctctgg 59
|||||||||||||||||||||||||| |||| ||||||||||||||||| |||||||| |
Sbjct: 201 agttccggctgcctgatggttcttcctttacaaaccagtttccttctgatgctcctctag 260
Query: 60 aagaagcgaggcagtttgctgcacgggtaagtttataaagatggctgtgtgggttagtga 119
|||||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 261 aagaagcgaggcagtttgctgcacaggtaagtttataaagatggttgtgtgggttagtga 320
Query: 120 agccttgcagaagaagtttcaaagcagaacttgaaggatatagataaattttgacttagc 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agccttgcagaagaagtttcaaagcagaacttgaaggatatagataaattttgacttagc 380
Query: 180 tccagaagaataacaggagacagccctgagatggaaggctttctggcttgtactatacgt 239
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 tccagaagaataacaggagacagccctgagatggaaggctttctggcttgtattatacgt 440
Query: 240 gatctctgtatacagcccactcaggaaagttctactatcatg 281
|||| | |||||||||||||||||||||||||||||||||||
Sbjct: 441 gatcacagtatacagcccactcaggaaagttctactatcatg 482
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 684
Length adjustment: 9
Effective length of query: 274
Effective length of database: 675
Effective search space: 184950
Effective search space used: 184950
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
