MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-211B14
Chromosome	1 (Build37)
Map Location	71,535,007 - 71,535,328
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Spag16, A830006F12Rik, LOC100043210, EG667884, EG666083, LOC100042804, LOC100042809, Bard1, LOC667900, Abca12
Downstream gene	LOC629101, Atic, Fn1, LOC100042814, Gabarapl2-ps1_652.1, LOC383528, LOC675667, EG667931, EG433319, LOC667937, LOC100043255, Mreg, Pecr, Tmem169, Xrcc5, March4
Link	Open Mouse BAC browser

Click to get alignment info.

name	Spag16 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66722 MGI:1913972
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	A830006F12Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:320460 MGI:2444069
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043210 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043210
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs

name	EG667884 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667884 MGI:3648009
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	EG666083 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:666083 MGI:3649129
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins pseudo : _no_value

name	LOC100042804 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042804
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	LOC100042809 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042809
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 7 Proteins pseudo : _no_value

name	Bard1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12021 MGI:1328361
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC667900 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667900
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 12 Proteins pseudo : _no_value

name	Abca12 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74591 MGI:2676312
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 19 Proteins

name	LOC629101 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:629101
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 6 Proteins pseudo : _no_value

name	Atic (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108147 MGI:1351352
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Fn1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14268 MGI:95566
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042814 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042814
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs

name	Gabarapl2-ps1_652.1 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545326
definition	note : GABA(A) receptor-associated protein like 2 pseudogene 1_652.1 pseudo : _no_value

name	LOC383528 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383528
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 36 ESTs, 23 Proteins pseudo : _no_value

name	LOC675667 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:675667
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	EG667931 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:667931 MGI:3649116
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs

name	EG433319 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433319 MGI:3643453
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 604 ESTs, 10 Proteins

name	LOC667937 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:667937
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 mRNAs, 493 ESTs, 6 Proteins pseudo : _no_value

name	LOC100043255 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043255
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Mreg (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381269 MGI:2151839
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pecr (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:111175 MGI:2148199
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tmem169 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:271711 MGI:2442781
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Xrcc5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:22596 MGI:104517
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	March4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381270 MGI:2683550
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Spag16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70887604 GeneID:66722 MGI:1913972
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sperm associated antigen 16 transcript_id : NM_029160.2

name	Spag16 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142387346 GeneID:66722 MGI:1913972
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sperm associated antigen 16 transcript_id : NM_025728.2

name	A830006F12Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:70887781 GeneID:320460 MGI:2444069
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A830006F12 gene transcript_id : NM_177164.3

name	LOC100043210 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233922 GeneID:100043210
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 ESTs product : hypothetical protein LOC100043210 transcript_id : XM_001479869.1

name	LOC100042804 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233883 GeneID:100042804
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : similar to Ubtf protein transcript_id : XM_001478847.1

name	Bard1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118131098 GeneID:12021 MGI:1328361
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : BRCA1 associated RING domain 1 transcript_id : NM_007525.2

name	Abca12 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149233924 GeneID:74591 MGI:2676312
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 8 ESTs, 19 Proteins product : ATP-binding cassette, sub-family A (ABC1), member 12, transcript variant 3 transcript_id : XM_001002308.2

name	Atic (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801830 GeneID:108147 MGI:1351352
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase transcript_id : NM_026195.2

name	Fn1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:46849811 GeneID:14268 MGI:95566
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : fibronectin 1 transcript_id : NM_010233.1

name	LOC100042814 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233885 GeneID:100042814
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs product : hypothetical protein LOC100042814 transcript_id : XM_001478864.1

name	EG667931 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363480 GeneID:667931 MGI:3649116
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs product : predicted gene, EG667931 transcript_id : XM_993297.1

name	EG433319 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363482 GeneID:433319 MGI:3643453
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 604 ESTs, 10 Proteins product : predicted gene, EG433319 transcript_id : XM_484880.4

name	LOC100043255 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149233928 GeneID:100043255
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043255 transcript_id : XM_001479945.1

name	Mreg (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:53749211 GeneID:381269 MGI:2151839
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : melanoregulin transcript_id : NM_001005423.1

name	Pecr (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142350282 GeneID:111175 MGI:2148199
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : peroxisomal trans-2-enoyl-CoA reductase transcript_id : NM_023523.4

name	Tmem169 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801443 GeneID:271711 MGI:2442781
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : transmembrane protein 169 transcript_id : NM_175564.3

name	Xrcc5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:27753976 GeneID:22596 MGI:104517
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : X-ray repair complementing defective repair in Chinese hamster cells 5 transcript_id : NM_009533.1

name	March4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:113865912 GeneID:381270 MGI:2683550
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : membrane-associated ring finger (C3HC4) 4 transcript_id : NM_001045533.1

name	Spag16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70887605 CCDS:CCDS15027.1 GeneID:66722 MGI:1913972
definition	GO_component : GO:0005930 - axoneme [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0035086 - flagellar axoneme [Evidence IDA]; GO:0019861 - flagellum [Evidence IEA]; GO:0005874 - microtubule [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007283 - spermatogenesis [Evidence IMP] codon_start : 1 note : isoform 1 is encoded by transcript variant 1; sperm-associated WD repeat protein product : sperm associated antigen 16 isoform 1 protein_id : NP_083436.2

name	Spag16 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70887774 GeneID:66722 MGI:1913972
definition	GO_component : GO:0005930 - axoneme [Evidence IDA]; GO:0005737 - cytoplasm [Evidence IDA]; GO:0035086 - flagellar axoneme [Evidence IDA]; GO:0019861 - flagellum [Evidence IEA]; GO:0005874 - microtubule [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] GO_process : GO:0007283 - spermatogenesis [Evidence IMP] codon_start : 1 note : isoform 2 is encoded by transcript variant 2; sperm-associated WD repeat protein product : sperm associated antigen 16 isoform 2 protein_id : NP_080004.1

name	A830006F12Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:70887782 CCDS:CCDS15028.1 GeneID:320460 MGI:2444069
definition	GO_function : GO:0008233 - peptidase activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC320460 protein_id : NP_796138.2

name	LOC100043210 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233923 GeneID:100043210
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479919.1

name	LOC100042804 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233884 GeneID:100042804
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478897.1

name	Bard1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680768 CCDS:CCDS15029.1 GeneID:12021 MGI:1328361
definition	GO_component : GO:0031436 - BRCA1-BARD1 complex [Evidence ISS]; GO:0005737 - cytoplasm [Evidence ISS]; GO:0005622 - intracellular [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] [Evidence ISS]; GO:0000151 - ubiquitin ligase complex [Evidence ISS] GO_function : GO:0019900 - kinase binding [Evidence ISS]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] [Evidence ISS]; GO:0046982 - protein heterodimerization activity [Evidence ISS]; GO:0042803 - protein homodimerization activity [Evidence ISS]; GO:0003723 - RNA binding [Evidence ISS]; GO:0004842 - ubiquitin-protein ligase activity [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007050 - cell cycle arrest [Evidence ISS]; GO:0043066 - negative regulation of apoptosis [Evidence ISS]; GO:0031441 - negative regulation of mRNA 3'-end processing [Evidence ISS]; GO:0046826 - negative regulation of protein export from nucleus [Evidence ISS]; GO:0043065 - positive regulation of apoptosis [Evidence ISS]; GO:0045732 - positive regulation of protein catabolism [Evidence ISS]; GO:0016567 - protein ubiquitination [Evidence ISS]; GO:0042325 - regulation of phosphorylation [Evidence ISS]; GO:0006974 - response to DNA damage stimulus [Evidence ISS]; GO:0001894 - tissue homeostasis [Evidence ISS] codon_start : 1 product : BRCA1 associated RING domain 1 protein_id : NP_031551.1

name	Abca12 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149233925 GeneID:74591 MGI:2676312
definition	codon_start : 1 product : ATP-binding cassette, sub-family A (ABC1), member 12 isoform 3 protein_id : XP_001002308.2

name	Atic (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229048 CCDS:CCDS15030.1 GeneID:108147 MGI:1351352
definition	GO_function : GO:0003824 - catalytic activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003937 - IMP cyclohydrolase activity [Evidence IEA]; GO:0004643 - phosphoribosylaminoimidazolecarboxamide formyltransferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006164 - purine nucleotide biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation product : 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase protein_id : NP_080471.1

name	Fn1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:46849812 CCDS:CCDS15031.1 GeneID:14268 MGI:95566
definition	GO_component : GO:0016324 - apical plasma membrane [Evidence IDA]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IDA] [Evidence TAS]; GO:0005576 - extracellular region [Evidence IEA] GO_function : GO:0008201 - heparin binding [Evidence IEA]; GO:0016504 - protease activator activity [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI] [Evidence IEA] GO_process : GO:0006953 - acute-phase response [Evidence IEA]; GO:0007155 - cell adhesion [Evidence IDA]; GO:0007160 - cell-matrix adhesion [Evidence IDA]; GO:0007044 - cell-substrate junction assembly [Evidence IDA]; GO:0007169 - transmembrane receptor protein tyrosine kinase signaling pathway [Evidence NAS]; GO:0042060 - wound healing [Evidence IMP] codon_start : 1 note : fibronectin product : fibronectin 1 protein_id : NP_034363.1

name	LOC100042814 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233886 GeneID:100042814
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001478914.1

name	EG667931 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94363481 GeneID:667931 MGI:3649116
definition	codon_start : 1 product : hypothetical protein protein_id : XP_998391.1

name	EG433319 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:51705076 GeneID:433319 MGI:3643453
definition	codon_start : 1 product : hypothetical protein protein_id : XP_484880.1

name	LOC100043255 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149233929 GeneID:100043255
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479995.1

name	Mreg (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:53749212 CCDS:CCDS15032.1 GeneID:381269 MGI:2151839
definition	GO_process : GO:0042640 - anagen [Evidence IMP]; GO:0048066 - pigmentation during development [Evidence IMP] codon_start : 1 note : dilute suppressor protein product : whn-dependent transcript 2 protein_id : NP_001005423.1

name	Pecr (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31980804 GeneID:111175 MGI:2148199
definition	GO_component : GO:0005739 - mitochondrion [Evidence IDA]; GO:0005777 - peroxisome [Evidence ISS] [Evidence IEA] GO_function : GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0019166 - trans-2-enoyl-CoA reductase (NADPH) activity [Evidence ISS] [Evidence IEA] GO_process : GO:0006633 - fatty acid biosynthesis [Evidence IEA]; GO:0030497 - fatty acid elongation [Evidence ISS]; GO:0008610 - lipid biosynthesis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : perosisomal 2-enoyl-CoA reductase product : peroxisomal trans 2-enoyl CoA reductase protein_id : NP_076012.2

name	Tmem169 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30425360 CCDS:CCDS15033.1 GeneID:271711 MGI:2442781
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA] codon_start : 1 product : hypothetical protein LOC271711 protein_id : NP_780773.1

name	Xrcc5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27753977 GeneID:22596 MGI:104517
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005958 - DNA-dependent protein kinase complex [Evidence IEA]; GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0004003 - ATP-dependent DNA helicase activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0004386 - helicase activity [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0006310 - DNA recombination [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0006303 - double-strand break repair via nonhomologous end joining [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy note : Ku p80; Ku autoantigen product : X-ray repair complementing defective repair in Chinese hamster cells 5 protein_id : NP_033559.1

name	March4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:113865913 CCDS:CCDS15034.1 GeneID:381270 MGI:2683550
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] codon_start : 1 product : membrane-associated ring finger (C3HC4) 4 protein_id : NP_001038998.1

name	EG667884 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667884
definition	number : 1 pseudo : _no_value

name	EG667884 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667884
definition	number : 2 pseudo : _no_value

name	EG667884 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667884
definition	number : 3 pseudo : _no_value

name	EG667884 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667884
definition	number : 4 pseudo : _no_value

name	EG666083 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:666083
definition	number : 1 pseudo : _no_value

name	LOC100042809 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042809
definition	number : 1 pseudo : _no_value

name	LOC667900 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667900
definition	number : 2 pseudo : _no_value

name	LOC667900 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:667900
definition	number : 1 pseudo : _no_value

name	LOC675667 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:675667
definition	number : 1 pseudo : _no_value

name	(CDS detail)
type	STS
link
xref	UniSTS:128847
definition	standard_name : D1Mit481

name	(CDS detail)
type	STS
link
xref	UniSTS:128659
definition	standard_name : D1Mit304

name	(CDS detail)
type	STS
link
xref	UniSTS:178408
definition	standard_name : AV261009

name	(CDS detail)
type	STS
link
xref	UniSTS:243344
definition	standard_name : 4921511D23Rik

name	(CDS detail)
type	STS
link
xref	UniSTS:234148
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:128935
definition	standard_name : D1Mit78

name	(CDS detail)
type	STS
link
xref	UniSTS:158805
definition	standard_name : AF057157

name	(CDS detail)
type	STS
link
xref	UniSTS:271466
definition	standard_name : PMC162231P1

name	(CDS detail)
type	STS
link
xref	UniSTS:124715
definition	standard_name : A659

name	(CDS detail)
type	STS
link
xref	UniSTS:123806
definition	standard_name : 27.MMHAP91FLA6.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:207169
definition	standard_name : AW742323

name	(CDS detail)
type	STS
link
xref	UniSTS:207170
definition	standard_name : AW743021

name	(CDS detail)
type	STS
link
xref	UniSTS:234146
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:161328
definition	standard_name : RH124506

name	(CDS detail)
type	STS
link
xref	UniSTS:207487
definition	standard_name : AW742740

name	(CDS detail)
type	STS
link
xref	UniSTS:165083
definition	standard_name : AW212393

name	(CDS detail)
type	STS
link
xref	UniSTS:264012
definition	standard_name : FN1

name	(CDS detail)
type	STS
link
xref	UniSTS:234147
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:128517
definition	standard_name : D1Mit179

name	(CDS detail)
type	STS
link
xref	UniSTS:128461
definition	standard_name : D1Mit127

name	(CDS detail)
type	STS
link
xref	UniSTS:128465
definition	standard_name : D1Mit130

name	(CDS detail)
type	STS
link
xref	UniSTS:207458
definition	standard_name : AW109631

name	(CDS detail)
type	STS
link
xref	UniSTS:237494
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:271661
definition	standard_name : PMC17958P1

name	(CDS detail)
type	STS
link
xref	UniSTS:160916
definition	standard_name : RH118241

name	(CDS detail)
type	STS
link
xref	UniSTS:178411
definition	standard_name : AI314015

name	(CDS detail)
type	STS
link
xref	UniSTS:178199
definition	standard_name : G66995

name	LOC629101 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233926 GeneID:629101
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 ESTs, 6 Proteins product : similar to protein-tyrosine-phosphatase pseudo : _no_value transcript_id : XR_034440.1

name	LOC383528 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233888 GeneID:383528
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 36 ESTs, 23 Proteins product : similar to SLC25A5 protein pseudo : _no_value transcript_id : XR_033954.1

name	LOC667937 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149233927 GeneID:667937
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 20 mRNAs, 493 ESTs, 6 Proteins product : similar to ribosomal protein L15 pseudo : _no_value transcript_id : XR_034462.1

clone name	MSMg01-490D21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-482A20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068D11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072G08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-410O23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515J09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-371G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320N09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-270K15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194N05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-486B10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-295I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-506K05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-108F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-422H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-060D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-237N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-394H21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-208C21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-141C04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466K09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-157N17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318A12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262B02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469G06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-144H16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263A11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-346I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-143I11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396P18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-068P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-147O04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-311F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-461O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-308E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-427K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-262C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-137I09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280B15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-273L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194I22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-083N11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-515K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-155C17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155C18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-368L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-446K19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-481O07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520P09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-263J23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232I18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-392G05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-261K01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-324C11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482M18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444C18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338H18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-134H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084B20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-415I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420F04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-454P12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439K09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-165B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-470E19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-474B24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-161N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-398G03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-265L23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-160L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116D17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-377N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-105A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451G13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-192H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079D03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-292O16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266L03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-293L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168P07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-147P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069L21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313O01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-183N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-274O09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170N12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002C14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-028P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041C05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-312M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105N15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-284O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-195A15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-113J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-283J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-215P21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035L01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108I01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234I22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334P08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-039G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121O03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281K01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-333L07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-332C21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-021M24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271P18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-325A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-024G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221N16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-060G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047L14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-309G12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-001K16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061N06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302H06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133K03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-094C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-125G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265G22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054E13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-083K10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042I18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045P10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-349C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-252M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156B12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-277N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-227K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-298L10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-071K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-321J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172H15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057K17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-189H16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-140D17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058D05
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-211B14.T7 (MSMg01no211_b14.b1)	MSMg01-211B14.TJ (MSMg01no211_b14.g1)
ACC	AG392965	AG392966
length	730	768
length of high quality (start - end)	323 (46 - 368)	74 (294 - 367)
definition	CHROMAT_FILE: MSMg01no211_b14.b1 PHD_FILE: MSMg01no211_b14.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 20:35:57 2005	CHROMAT_FILE: MSMg01no211_b14.g1 PHD_FILE: MSMg01no211_b14.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 20:35:58 2005
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG AATTCTACATGAATTATGTTGGATCCTCACAGTTAATCTCATTCAAGGAC ACACATCGTATTTGTTTATCCTGCTACTAAAGATACTAGCTTGCCTCTCT TGGTGAAGATAGTATCTGCTGAGTCCTGGTGCTTACATTTTGGGATCTGT AAACAGACCTTCAGAACAACACTCCTAACTCCTTCATAGAGATTAGCCTG TGTAATCCAATCTGCTATCTTACAGAACAAATTCTTCATCTTACACCACC CCTTAGTAACAGGAGCCCAGATATGCTGAGGAAGCATTTGTGTCACTCCT TTGTCTATTGCATTATTGAGTCCCCTAACCAGGCCTGAAGGAGTGAGGAT TCTCCAAGAATCTCAGGCAGAGAGAAGAAAAGGTCCTGAGCCTGATGACC CAGATAAGGAGGTTATCTTCTTCAAAGAGACTTTACATGGTGCTGAAACT TGCAGGACATGATGGCAGCTGGAAGCCTAAGGAACAACAGCTATGTCAGT CATCATTAGAGCCACACACTGACCAGTACTGCTTGGCTATGCATTCCTCT TAACCTCTTTTTAAACCTAAGCCTTATATCAGGACCTTTAAGATGAGCTT TGCAGGCATTGGGGTGGCCGGTGGCGTCCCTTTGCCCCCTTTTTTTTCCT CCTCTTCCGCCCCCGTTTCCTTTTACCAAT	TCCCTCCTTCCCTCTTCCTTACCATCTACTACTATATATNNNNNACACTA TGATATGGGTAGCCTGGCGGCCGCCTGGCTTCAAAAGAAAGGNNGAANAN AGAAGGTTCCAAAAAAAAGGAGGANNGNNNNGNANAGNNGNGAANCCGGG ANCNCAAGGNATACACCCCAAACAAAAAAGCAGNAGGCNCCNAANCGGAN NCATGCNCGGAGACACTACGGNGGAAAAGCCAGAACCAAAGGCCCATACA CGGCACAACANAAGTAAGAAGAAACATCAAAAAACCAAAAGAAAAACTTC AATTCTGCTTCATACAAACTCACTTTGAGATTCTTTTCTTTAGTGAAGTC AAAATCCTGGCTTCTTTTTTTTAGAAGNCNCTGGAACAAGTAACACCTGC AGCTTTTTTTTTTCCCCCAACGGNCCCCTGGANAGGAAACCAAANNGNCN NGACNCNCNGNCNNCCAAACCNGAACNGGACACGGGGGGCGGGGGGAACA ANCNAAGCCAACCGCGGACAGGGNACCCCCGGNGCCCNANAAGCAGACAC GAGGACCCNCGCGCAANNACGGGGACCCCAACCAACACAACACAAGCACC AGAAAACCAAACCCACGACCCCACCCCGACGGACCGCGCGACAACCCGAA CGACCCAAGACACCCGCAGAGGCATTCACAGGCAGACGCACACCCACAAT ATCTTGCGCATAGTAGGGAAACTTCATGAAGGTTCCCTATCTATTTTTGA ACTGAACTTTTTCATAAT
quality values	Open. Hide. 8 8 8 8 8 13 12 31 39 39 37 37 37 31 31 37 37 32 32 28 37 32 33 41 59 30 29 31 31 31 35 39 39 39 39 35 37 37 43 43 37 37 24 30 30 42 43 57 68 47 47 47 47 68 68 68 68 68 68 68 51 51 51 47 42 41 47 47 48 48 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 48 48 48 48 48 48 51 51 51 51 68 68 50 50 50 50 68 68 68 68 68 68 68 68 68 68 68 57 44 38 24 13 13 13 21 32 38 44 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 62 62 62 62 62 62 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 57 57 57 57 59 59 59 57 57 57 57 68 68 68 68 57 57 57 57 57 59 59 68 68 68 68 57 57 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 68 57 57 57 57 57 57 68 68 68 68 68 59 68 68 68 68 68 57 68 68 68 68 68 68 68 59 59 57 57 57 47 47 48 48 48 43 59 59 68 68 68 68 68 68 68 68 68 68 68 68 59 59 59 59 59 59 59 59 59 59 59 59 57 57 57 57 57 39 39 35 24 24 18 18 23 20 20 11 15 16 15 12 12 12 12 11 11 11 15 12 12 12 15 33 34 47 50 50 50 48 50 43 43 43 43 43 48 48 48 48 57 59 59 59 59 59 57 57 57 57 57 57 59 54 59 48 48 46 46 43 43 43 39 39 30 30 42 44 44 43 43 43 44 47 57 57 57 57 57 57 59 57 57 57 57 48 48 47 42 42 42 42 57 57 57 57 57 44 46 46 54 54 57 57 57 68 68 68 68 57 57 57 57 57 57 48 48 48 48 57 57 57 59 59 59 59 59 43 41 41 59 59 59 59 59 57 57 57 57 57 43 39 39 39 44 57 44 54 54 54 48 48 44 39 35 35 35 39 43 57 54 54 48 48 48 48 40 40 28 28 25 37 37 43 43 43 43 40 39 39 32 39 43 39 39 37 37 30 30 30 34 34 31 31 24 25 12 12 12 25 30 30 30 28 28 28 35 30 37 39 39 30 24 14 14 14 14 23 24 32 35 37 37 36 43 43 48 57 59 59 50 41 41 37 31 35 35 59 59 37 31 31 37 37 37 59 59 59 59 59 44 41 41 43 43 41 39 39 32 31 20 21 25 32 31 28 32 30 43 41 27 27 32 37 37 37 39 32 26 19 19 15 28 26 15 15 13 19 19 22 25 25 15 10 8 8 8 10 10 14 12 9 9 9 9 9 9 10 10 10 10 11 11 16 21 24 19 14 18 12 14 8 8 8 9 15 11 11 11 17 14 9 9 9 17 13 18 10 10 10 15 15 12 12 10 15 9 9 9 15 10 10 9 9 9 12 11 14 16 18 15 15 11 10 9 8 8 6 6	Open. Hide. 9 9 9 10 12 10 11 11 10 17 11 8 7 7 7 6 8 8 8 19 8 6 6 8 6 6 8 6 6 6 6 6 8 8 9 9 10 10 3 0 0 0 0 0 3 6 6 6 6 6 8 8 8 8 8 12 17 19 19 10 10 11 26 22 37 29 22 19 19 29 24 24 30 30 21 23 11 9 9 9 7 7 6 6 6 6 7 7 9 10 10 3 0 0 3 14 3 0 3 0 3 23 23 19 9 9 9 9 9 9 9 9 12 19 27 32 19 22 9 9 9 27 27 3 0 0 3 0 0 0 0 3 0 3 0 3 3 0 0 3 0 3 7 3 0 3 7 7 7 7 3 0 3 0 3 8 7 7 3 0 3 12 12 9 9 9 13 14 11 12 12 24 30 47 47 29 22 10 9 9 17 17 3 0 3 29 17 3 0 3 3 0 3 3 0 3 7 6 3 0 0 3 23 23 23 3 0 3 25 25 37 37 37 37 37 37 59 40 22 22 3 0 3 7 7 9 9 9 9 13 24 24 30 39 39 42 47 47 59 27 23 9 9 9 9 27 25 30 30 10 9 9 9 9 19 23 59 27 27 3 0 3 9 9 9 17 9 9 9 9 9 9 18 10 11 11 10 10 10 17 24 23 23 9 9 12 16 29 32 18 9 9 9 9 16 27 41 39 39 39 39 39 37 44 59 44 47 47 46 46 43 43 43 43 34 32 26 23 23 37 41 57 43 43 43 39 39 32 39 39 59 48 57 59 59 59 48 48 48 42 43 40 40 39 35 47 39 43 47 48 48 48 59 59 59 48 46 46 40 39 23 23 11 12 12 19 21 31 22 14 12 9 9 9 16 18 3 0 3 0 3 27 25 25 25 11 11 11 17 17 32 32 39 47 44 41 50 37 37 23 23 9 9 7 8 11 13 26 17 21 16 10 9 9 10 10 12 3 3 3 9 9 3 0 3 18 13 11 11 9 9 3 0 3 9 9 15 9 9 7 8 8 8 3 0 0 3 0 3 0 0 3 23 3 0 3 0 3 0 3 0 3 0 0 3 12 9 10 9 9 3 0 3 6 6 3 0 3 9 9 11 11 9 9 11 15 9 9 8 8 8 8 8 10 11 16 17 17 18 18 3 0 3 0 3 12 23 30 26 22 16 8 6 6 8 8 8 14 26 26 20 11 3 0 3 6 7 7 9 7 9 3 0 3 23 9 3 0 3 0 3 6 6 15 14 28 24 17 11 10 10 10 10 8 6 6 6 3 0 3 9 9 9 10 12 3 0 0 3 9 9 15 15 24 26 16 11 11 9 8 8 8 8 10 13 10 10 10 12 21 32 37 37 37 37 19 19 10 8 8 6 6 8 8 8 12 16 26 29 22 12 9 8 17 10 17 12 23 8 6 6 9 8 9 9 9 9 9 11 11 19 18 22 19 12 8 6 6 8 8 6 6 9 9 8 9 8 7 7 6 6 6 8 8 8 8 11 14 14 14 12 10 8 7 7 6 6 6 6 8 10 8 8 6 6 7 7 8 13 11 11 9 9 8 6 6 6 8 6 6 6 6 6 6 8 9 8 8 8 8 10 10 12 10 10 8 8 8 8 10 8 9 10 10 9 9 9 9 9 11 11 12 9 9 9 11 10 10 8 8 8 8 10 15 12 9 14 13 13 9 15 11 11 11 11 12 8 8 8 8 8 10 15 10 9 9 9 8 10 12 14 12 9 12 12 12 11 11

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no211_b14.b1 MSMg01no211_b14.b1 CHROMAT_FILE:
MSMg01no211_b14.b1 PHD_FILE: MSMg01no211_b14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:35:57 2005
         (323 letters)



>mm_chr1_71534804_71535528
          Length = 725

 Score =  603 bits (312), Expect = e-177
 Identities = 319/322 (99%), Gaps = 2/322 (0%)
 Strand = Plus / Plus

                                                                       
Query: 4   ggaattctacatgaattatgttggatcctcacagttaatctcattcaaggacacacatcg 63
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattctacatgaattatgttggatcctcacagttaatctcattcaaggacacacatcg 263

                                                                       
Query: 64  tatttgtttatcctgctactaaagatactagcttgcctctcttggtgaagatagtatctg 123
           ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tatttgtttatcctgttactaaagatactagcttgcctctcttggtgaagatagtatctg 323

                                                                       
Query: 124 ctgagtcctggtgcttacattttgggatctgtaaacagaccttcagaacaacactcctaa 183
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ctgagtcctggtgcttacattttgggatctgtaaacagaccttcagaacaacactcctaa 383

                                                                       
Query: 184 ctccttcatagagattagcctgtgtaatccaatctgctatcttacagaacaaattcttca 243
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 ctccttcatagagattagcctgtgtaatccaatctgctatcttacagaacaaattcttca 443

                                                                       
Query: 244 tcttacaccaccccttagtaacaggagcccagatatgctga--ggaagcatttgtgtcac 301
           |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||
Sbjct: 444 tcttacaccaccccttagtaacaggagcccagatatgctgatcggaagcatttgtgtcac 503

                                 
Query: 302 tcctttgtctattgcattattg 323
           ||||||||||||||||||||||
Sbjct: 504 tcctttgtctattgcattattg 525


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 725
Length adjustment: 9
Effective length of query: 314
Effective length of database: 716
Effective search space:   224824
Effective search space used:   224824
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information