Query= MSMg01no212_o12.b1 MSMg01no212_o12.b1 CHROMAT_FILE:
MSMg01no212_o12.b1 PHD_FILE: MSMg01no212_o12.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:38:48 2005
(311 letters)
>mm_chr1_91291234_91291944
Length = 711
Score = 478 bits (247), Expect = e-139
Identities = 281/305 (92%), Gaps = 22/305 (7%)
Strand = Plus / Minus
Query: 5 gaattctctctctcttctgctctccccctagcccccatgtagatacacacacacacacac 64
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 gaattctctctctcttctgctctccccctagcccccatgtag------------------ 541
Query: 65 acacacacacacccacacacacacacacacacactgattgatattgcagatacatttgga 124
||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 540 acacacacaca--cacacacacacacacacaga--gattgatattgcagatacatttgga 485
Query: 125 actgaactttcaagacaagctgtatttcatcactgtttccatgtgcatctctggagagca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 actgaactttcaagacaagctgtatttcatcactgtttccatgtgcatctctggagagca 425
Query: 185 aagaacactcacatgtgcagaatgtaaatcatacacacaccactgtctcctaatgcacac 244
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 424 aagaacactcacatgtgcagaatgtaaatcatatacacaccactgtctcctaatgcacac 365
Query: 245 tctgcactcaaattctatttgtttttcaggaatgtctctcattgcaattcatttttctga 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 tctgcactcaaattctatttgtttttcaggaatgtctctcattgcaattcatttttctga 305
Query: 305 tgcag 309
|||||
Sbjct: 304 tgcag 300
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 311
Length of database: 711
Length adjustment: 9
Effective length of query: 302
Effective length of database: 702
Effective search space: 212004
Effective search space used: 212004
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no212_o12.g1 MSMg01no212_o12.g1 CHROMAT_FILE:
MSMg01no212_o12.g1 PHD_FILE: MSMg01no212_o12.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:38:48 2005
(283 letters)
>mm_chr1_91135614_91136296
Length = 683
Score = 516 bits (267), Expect = e-151
Identities = 273/275 (99%)
Strand = Plus / Plus
Query: 5 gtcatgtccatcagaggtttcatcgggacacagccctgctcgtgactccatgtatttcta 64
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 205 gtcatgtccatcagaggtttcatcaggacacagccctgctcgtgactccatgtatttcta 264
Query: 65 cagctactttagagactgcagcccacggaagggcagaaatggtacccagccttttaaagg 124
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 265 cagctactttagagactgcagcccacggaagggcagaaatggtacccagccttttaaaag 324
Query: 125 attcctccacggtcaggtctgcagctgagacatcccaccatcatctcccttcacctccca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 attcctccacggtcaggtctgcagctgagacatcccaccatcatctcccttcacctccca 384
Query: 185 tggtttcccaatatttgttcccagaaaaccacagcagggccttactctttgtcttctttg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tggtttcccaatatttgttcccagaaaaccacagcagggccttactctttgtcttctttg 444
Query: 245 tcccagttgcctggaggctgtgggttatttcactg 279
|||||||||||||||||||||||||||||||||||
Sbjct: 445 tcccagttgcctggaggctgtgggttatttcactg 479
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 283
Length of database: 683
Length adjustment: 9
Effective length of query: 274
Effective length of database: 674
Effective search space: 184676
Effective search space used: 184676
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
