CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGG
AATTCATCAGTGGCCTCAAATATGTCACATTTGAGTGCAGAGCAATTGAG
TTTGAAAAAAATTTTTTTTCTTTTCGAGAAATATGTAACGTGGGCCAGCA
GCGCCCTCTACTGTTTCCACTGGAAATTTTCTAGGCAAAGATGCTTCTCA
GAGTGCAGATATGGACATTGTTTTTACACGTTTGGGTTTTAATTATCAGT
GAATACAGTTTTCGAATCTTATTTTCATGATTTGTGGCACTCTATGCTTT
TCTTTTACTTTAAACATAAGCGCCATCCTATCCACAATAGCTTTTAACAT
CAGCCTCTTATGTTCTTAAGTTGAACACTCAGCCCTAGCCCTGGCTTCTC
TAGATGCCCATGTATGGCAAAACGATGATGTTAGCTATTAACATTGTGGA
GCTCATTACAAAAAAAGCCTATTTTCCAGGTCAATAATCTGATCTTAAAT
ATGTAAGTCCATTTTATTTATGCTTTAATTTAACATCACTGTAAGATAAT
TTCTTTCACCCTTAAAGAAAGAATCATCCTATAGTGATAAAGTCTGTGAG
TGATTTAACATCAGGTGATGCAATTACATGAGNAAATTTAGGGTGCAATT
TTTAACTCATTTTCAACTGTAGTCTCTTAGCTGTGACTTCATTCTCCGTG
GTTTCGGTAACCTTCCTTCAACCATGGNCC

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCTAATTATGTTTAGTCCCAAATGAACC
AAGGATTTCAAAAAGCTGCCTCACTGTTATTAGAAAGAACATAGGCCAGT
CCAAAGAGCTACTATGATATGAGATGGAGATGCAGTCGGTAGCAGATGAA
GACGAGACCTTTTCCACCATTATTTGGCTATAACCAGAAAAGGTTTAGCA
GTGAGAAAAGTGTTAGTAACGTCCCACTACTACTGCTGCTCATATGGAGG
AAAGGAAGCAAGAACTCGGATCCGAGTGTGGGTGTTTGAATTCTCAGTCT
GATCCCAGCTGTTTCTTTTTTGTGCCCGCCTACTCCGTGGCCTCAAGGTG
ACACTGGAATTTTAGCAATGCCCACAACAGATGAATTGACTGGAGGCGTG
GGGCCGATAATGCACAAGTGGCAGTAAAAATAATTCATGGATCATCTCTC
TCTCTCTCCCCCCCTCCCCCTCCCCCTCCCTCTCTCCCCTTGCATACTAT
GTGAATGTGTTTTTAAATTCATGGATGTCATCATATTTTTCAATCAGAGA
TGAAACTGCTATCCCATTGGCTTCAATAGATGGTTAGGTTTATTTTCCTT
TTTGGAATTGTCATTAAAAGTGTCGTGCCTCTAGTCCTGTTGTTATACAC
GCTTGAGGTTTCCCTGATGAATTGAACCTTTTGTN

Query= MSMg01no214_m08.b1 MSMg01no214_m08.b1 CHROMAT_FILE:
MSMg01no214_m08.b1 PHD_FILE: MSMg01no214_m08.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:41:12 2005
         (323 letters)



>mm_chr1_24374161_24374883
          Length = 723

 Score =  617 bits (319), Expect = 0.0
 Identities = 319/319 (100%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcatcagtggcctcaaatatgtcacatttgagtgcagagcaattgagtttgaaaaa 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 523 gaattcatcagtggcctcaaatatgtcacatttgagtgcagagcaattgagtttgaaaaa 464

                                                                       
Query: 65  aattttttttcttttcgagaaatatgtaacgtgggccagcagcgccctctactgtttcca 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 463 aattttttttcttttcgagaaatatgtaacgtgggccagcagcgccctctactgtttcca 404

                                                                       
Query: 125 ctggaaattttctaggcaaagatgcttctcagagtgcagatatggacattgtttttacac 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 403 ctggaaattttctaggcaaagatgcttctcagagtgcagatatggacattgtttttacac 344

                                                                       
Query: 185 gtttgggttttaattatcagtgaatacagttttcgaatcttattttcatgatttgtggca 244
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 343 gtttgggttttaattatcagtgaatacagttttcgaatcttattttcatgatttgtggca 284

                                                                       
Query: 245 ctctatgcttttcttttactttaaacataagcgccatcctatccacaatagcttttaaca 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 283 ctctatgcttttcttttactttaaacataagcgccatcctatccacaatagcttttaaca 224

                              
Query: 305 tcagcctcttatgttctta 323
           |||||||||||||||||||
Sbjct: 223 tcagcctcttatgttctta 205


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 723
Length adjustment: 9
Effective length of query: 314
Effective length of database: 714
Effective search space:   224196
Effective search space used:   224196
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no214_m08.g1 MSMg01no214_m08.g1 CHROMAT_FILE:
MSMg01no214_m08.g1 PHD_FILE: MSMg01no214_m08.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:41:12 2005
         (295 letters)



>mm_chr1_24371293_24371987
          Length = 695

 Score =  557 bits (288), Expect = e-163
 Identities = 291/292 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   ctaattatgtttagtcccaaatgaaccaaggatttcaaaaagctgcctcactgttattag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctaattatgtttagtcccaaatgaaccaaggatttcaaaaagctgcctcactgttattag 260

                                                                       
Query: 61  aaagaacataggccagtccaaagagctactatgatatgagatggagatgcagtcggtagc 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 aaagaacataggccagtccaaagagctactatgatatgagatggagatgcagtcggtagc 320

                                                                       
Query: 121 agatgaagacgagaccttttccaccattatttggctataaccagaaaaggtttagcagtg 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agatgaagacgagaccttttccaccattatttggctataaccagaaaaggtttagcagtg 380

                                                                       
Query: 181 agaaaagtgttagtaacgtcccactactactgctgctcatatggaggaaaggaagcaaga 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agaaaagtgttagtaacgtcccactactactgctgctcatatggaggaaaggaagcaaga 440

                                                               
Query: 241 actcggatccgagtgtgggtgtttgaattctcagtctgatcccagctgtttc 292
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 actcggatcggagtgtgggtgtttgaattctcagtctgatcccagctgtttc 492


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 295
Length of database: 695
Length adjustment: 9
Effective length of query: 286
Effective length of database: 686
Effective search space:   196196
Effective search space used:   196196
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)