Query= MSMg01no214_n13.b1 MSMg01no214_n13.b1 CHROMAT_FILE:
MSMg01no214_n13.b1 PHD_FILE: MSMg01no214_n13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:41:18 2005
(345 letters)
>mm_chr1_24768602_24769348
Length = 747
Score = 617 bits (319), Expect = 0.0
Identities = 342/355 (96%), Gaps = 10/355 (2%)
Strand = Plus / Plus
Query: 1 taaagtaatattgagaaagtaaattataagttatgtacgaattaaatcctgttttactgt 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 201 taaagtaatattgagaaagtaaattataagttatgtaggaattaaatcctgttttactgt 260
Query: 61 agatttatggtactacaatatgtcagcattgcttttattgaaaatctgacaaaataaaag 120
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 261 agatttatggtactacaatatgtcagcattgcttttattgaaaatctgaaaaaataaaac 320
Query: 121 ctaggtcatactgactgagttaataaagatttctttttaaaaattttaattacaca--ga 178
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 321 ctaggtcatactgactgagttaataaagatttctttttaaaaattttaattacacataga 380
Query: 179 gtcatatacgcacacatgtgtgcaaacacacacacacacacacacacacacacaca---- 234
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtcatatacgcacacatgtgtgcaaacacacacacacacacacacacacacacacacaca 440
Query: 235 ----gggagggtgtacatagatgtccatgagaatactacagatacttgtggaggtcagag 290
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 cacggggagggtgtacatagatgtccatgagaatactacagatacttgtggaggtcagag 500
Query: 291 gcattggatcccctggagctgctgttagagttgtctgtgagtcctccaatgtggt 345
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gcattggatcccctggagctgctgttagagttgtctgtgagtcctccaatgtggt 555
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 345
Length of database: 747
Length adjustment: 9
Effective length of query: 336
Effective length of database: 738
Effective search space: 247968
Effective search space used: 247968
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no214_n13.g1 MSMg01no214_n13.g1 CHROMAT_FILE:
MSMg01no214_n13.g1 PHD_FILE: MSMg01no214_n13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:41:18 2005
(290 letters)
>mm_chr1_24927299_24927988
Length = 690
Score = 522 bits (270), Expect = e-153
Identities = 285/290 (98%)
Strand = Plus / Minus
Query: 1 tatccacggtcactcagggaccttcatcatgggtaaacccataagtgggtggggagaaga 60
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 490 tatccacggtcactcagggaccttcattatgggtaaacccataagtgggtggggagaaga 431
Query: 61 gcaaggggtatcaggtgccaacattccgttacaataattaccactgctgctaagtggcat 120
||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||
Sbjct: 430 gcaaggggtatcaggtgccaacattccattacaacaattaccactgctgctaagtggcat 371
Query: 121 gcctttaaatgtcccctgattaagccgatggcttgcaaatcgatcaggtgaaaactgaca 180
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 gcctttaaatgtcccctcattaagccgatggcttgcaaatcgatcaggtgaaaactgaca 311
Query: 181 cgtctttaacattcataaaatggtttagatatcatagtgttgagcctgatggcttatact 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 310 cgtctttaacattcataaaatggcttagatatcatagtgttgagcctgatggcttatact 251
Query: 241 gattttaacccacaatcagacatctagtagtaaaagtctgtgcatataaa 290
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 gattttaacccacaatcagacatctagtagtaaaagtctgtgcatataaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 290
Length of database: 690
Length adjustment: 9
Effective length of query: 281
Effective length of database: 681
Effective search space: 191361
Effective search space used: 191361
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
