Query= MSMg01no215_g04.b1 MSMg01no215_g04.b1 CHROMAT_FILE:
MSMg01no215_g04.b1 PHD_FILE: MSMg01no215_g04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:42:02 2005
(313 letters)
>mm_chr1_76697914_76698626
Length = 713
Score = 491 bits (254), Expect = e-143
Identities = 299/318 (94%), Gaps = 9/318 (2%)
Strand = Plus / Plus
Query: 5 gaattcagatctagtgctgattttattttaaaaaaa-acattttttcaaaggaaaacatt 63
|||||||||||||||||| ||||| ||| ||||||| |||| ||||||||||||||||||
Sbjct: 196 gaattcagatctagtgcttattttctttcaaaaaaacacatattttcaaaggaaaacatt 255
Query: 64 ttatcaaatgaggacactgtgatgtgtttcacagcaga-------tt-gctgccaaatac 115
|||||||||||||| ||||||||||||||||||||||| || |||||| |||||
Sbjct: 256 ttatcaaatgaggagactgtgatgtgtttcacagcagataaacagttggctgccgaatac 315
Query: 116 tcctggagagagcttagaacaaagcagagtgactcgaactggttttccatttgtctttct 175
|||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 316 tcctggagagagcttagaacaaagcagagtgagtcgaactggttttccatttgtttttct 375
Query: 176 tttctccctctgtgtgtttgtccatctctacctctgaatagccaatatagtattcttcct 235
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 376 tttctccctctgtgtgtttgtccatctctacctctgaatagccaatatagtattcttcct 435
Query: 236 gagaggagggaaactgtatccgcgtttgcttttatctttactctcttttaaaaattctac 295
||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||
Sbjct: 436 gagaggagggaaactgtatccacgtttgcttttatctttactctctttttaaaattctac 495
Query: 296 aggtatagaaaaacatag 313
||||||||||||||||||
Sbjct: 496 aggtatagaaaaacatag 513
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 313
Length of database: 713
Length adjustment: 9
Effective length of query: 304
Effective length of database: 704
Effective search space: 214016
Effective search space used: 214016
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no215_g04.g1 MSMg01no215_g04.g1 CHROMAT_FILE:
MSMg01no215_g04.g1 PHD_FILE: MSMg01no215_g04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:42:02 2005
(144 letters)
>mm_chr1_76788190_76788733
Length = 544
Score = 279 bits (144), Expect = 7e-80
Identities = 144/144 (100%)
Strand = Plus / Minus
Query: 1 ttagctgagatatgctaaacggattccataattacacaaattcaaaggcaatgctagaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 344 ttagctgagatatgctaaacggattccataattacacaaattcaaaggcaatgctagaaa 285
Query: 61 gagactgcagataggaacatgtgctttctgtagacagacatgcttcctcagggaaatgga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 284 gagactgcagataggaacatgtgctttctgtagacagacatgcttcctcagggaaatgga 225
Query: 121 taagaacctgtgctcactactctg 144
||||||||||||||||||||||||
Sbjct: 224 taagaacctgtgctcactactctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 144
Length of database: 544
Length adjustment: 8
Effective length of query: 136
Effective length of database: 536
Effective search space: 72896
Effective search space used: 72896
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
