Query= MSMg01no217_f05.b1 MSMg01no217_f05.b1 CHROMAT_FILE:
MSMg01no217_f05.b1 PHD_FILE: MSMg01no217_f05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:44:48 2005
(317 letters)
>mm_chr1_191908042_191908754
Length = 713
Score = 543 bits (281), Expect = e-159
Identities = 303/315 (96%), Gaps = 10/315 (3%)
Strand = Plus / Plus
Query: 5 gaattcctcccggagaaccttgatacctttagctgaaacaggtctcaggggagaattgga 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcctcccggagaaccttgatacctttagctgaaacaggtctcaggggagaattgga 264
Query: 65 ctttgtcagtgatttggatatccctcccccctccataacttctgctgttttgaagatgga 124
||| |||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct: 265 cttcgtcagtgatttggata------ccccc-ccataacttctgctgttttgaagatgga 317
Query: 125 gcccatttcacaagggccacagcaggcattgtcacaggtatgactttctactgtgctt-- 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 318 gcccatttcacaagggccacagcaggcattgtcacaggtatgactttctactgtgcttgg 377
Query: 183 -ggggggggcagcagaaagattcctcttctgacacctgcatctccccagcatgttaggga 241
|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 378 gggggggggcagcagaaagattcctctcctgacacctgcatctccccagcatgttaggga 437
Query: 242 aactcaaacacaggcatacatatcttgccaaacccagacactctaaatcctaacaagtag 301
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 438 aactcaaacacaggcatacatatcttgccaaacccagacactctaaatcctaacaagtag 497
Query: 302 gcaggatgtagagga 316
|||||||||||||||
Sbjct: 498 gcaggatgtagagga 512
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 317
Length of database: 713
Length adjustment: 9
Effective length of query: 308
Effective length of database: 704
Effective search space: 216832
Effective search space used: 216832
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no217_f05.g1 MSMg01no217_f05.g1 CHROMAT_FILE:
MSMg01no217_f05.g1 PHD_FILE: MSMg01no217_f05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:44:48 2005
(244 letters)
>mm_chr1_191915219_191915862
Length = 644
Score = 472 bits (244), Expect = e-138
Identities = 244/244 (100%)
Strand = Plus / Minus
Query: 1 caacgcagagccctgagagccctccgggggataagggcgctattactttgcacgtgcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 caacgcagagccctgagagccctccgggggataagggcgctattactttgcacgtgcttc 385
Query: 61 agaaatgcgaagtgtgtctttacagaacttttagccaaccccctggcagatgttgaccgc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agaaatgcgaagtgtgtctttacagaacttttagccaaccccctggcagatgttgaccgc 325
Query: 121 ttttgcttatgtatacatcagttgcagaacactaaaacagagattggaaattttaattta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 ttttgcttatgtatacatcagttgcagaacactaaaacagagattggaaattttaattta 265
Query: 181 gtcgaggcagttgggctaaaatgatggcttttgttgaaaccattaaatagagctgcctaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 gtcgaggcagttgggctaaaatgatggcttttgttgaaaccattaaatagagctgcctaa 205
Query: 241 tgaa 244
||||
Sbjct: 204 tgaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 244
Length of database: 644
Length adjustment: 9
Effective length of query: 235
Effective length of database: 635
Effective search space: 149225
Effective search space used: 149225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
