Query= MSMg01no231_b07.b1 MSMg01no231_b07.b1 CHROMAT_FILE:
MSMg01no231_b07.b1 PHD_FILE: MSMg01no231_b07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:47:17 2005
(315 letters)
>mm_chr1_80094196_80094910
Length = 715
Score = 563 bits (291), Expect = e-165
Identities = 306/311 (98%)
Strand = Plus / Plus
Query: 5 gaattcttactgttgaggatcaggtaggactagagcatcagagacatcttgtctaggtaa 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttactgttgaggatcaggtaggactagagcatcagagacatcttgtctaggtaa 264
Query: 65 caaaactgtaatgaacccacccactttcagcgctgctgtctcccattgcatgagccactg 124
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 caaaactgtaatgaaaccacccactttcagcgctgctgtctcccattgcatgagccactg 324
Query: 125 acttgtgtgtgttatatatgttggtatgaattgtatttctgacacctgaaacccagtctc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 acttgtgtgtgttatatatgttggtatgaattgtatttctgacacctgaaacccagtctc 384
Query: 185 tcggtcacagcaagtgctttccatgcatgtactacatgcaggggagctattggagtttaa 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 tcggtcacagcaagtgctttccatgcatgtactacatgcaggggagctattggagtttaa 444
Query: 245 gaattaaatgtggtcctcactgtcctggagcctataatctatgaagtaaatgtgtcgaga 304
||||||||||| || ||||||||||||||||||| || ||||||||||||||||||||||
Sbjct: 445 gaattaaatgttgttctcactgtcctggagcctagaacctatgaagtaaatgtgtcgaga 504
Query: 305 ctatctaaggg 315
|||||||||||
Sbjct: 505 ctatctaaggg 515
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 715
Length adjustment: 9
Effective length of query: 306
Effective length of database: 706
Effective search space: 216036
Effective search space used: 216036
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no231_b07.g1 MSMg01no231_b07.g1 CHROMAT_FILE:
MSMg01no231_b07.g1 PHD_FILE: MSMg01no231_b07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:47:17 2005
(183 letters)
>mm_chr1_80235756_80236338
Length = 583
Score = 331 bits (171), Expect = 2e-95
Identities = 181/189 (95%), Gaps = 8/189 (4%)
Strand = Plus / Minus
Query: 1 actgctaggacagcagaaaaccaggtctttggatgactcttgggctacttctgtgttcag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 366 actgctaggacagcagaaaaccaggtctttggatgactcttgggctacttctgtgttcag 307
Query: 61 tgaaagaagaggaacacatctgcacacagttctctacacaggtgggagggtgtcacagat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 306 tgaaagaagaggaacacatctgcacacagttctctacacaggtgggagggtgtcacagat 247
Query: 121 aggcacggggccctctggaccatttgttgtt--------gttagttagttagtttggttg 172
||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 246 aggcacggggccctctggaccatttgttgttgttagttagttagttagttagtttggttg 187
Query: 173 gttggttgg 181
|||||||||
Sbjct: 186 gttggttgg 178
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 183
Length of database: 583
Length adjustment: 8
Effective length of query: 175
Effective length of database: 575
Effective search space: 100625
Effective search space used: 100625
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
