Query= MSMg01no233_h03.b1 MSMg01no233_h03.b1 CHROMAT_FILE:
MSMg01no233_h03.b1 PHD_FILE: MSMg01no233_h03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:09 2005
(194 letters)
>mm_chr1_58141963_58142556
Length = 594
Score = 360 bits (186), Expect = e-104
Identities = 189/190 (99%)
Strand = Plus / Minus
Query: 1 agagagggccttggcgctgaactcttgcttgtaatgggtagtatcaacatgcttgtacat 60
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 390 agagagggccttggcgctgaactcttgcttgtaatgggtagtatcaacgtgcttgtacat 331
Query: 61 atttatggttcgaacctatgaaaggagacattaaaatgagagggaagctcagaagacaag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 atttatggttcgaacctatgaaaggagacattaaaatgagagggaagctcagaagacaag 271
Query: 121 gtcgtgtccactaaatggcctcttcccccactctgcccatcctaaaagggccaagctggg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 gtcgtgtccactaaatggcctcttcccccactctgcccatcctaaaagggccaagctggg 211
Query: 181 ttctacccag 190
||||||||||
Sbjct: 210 ttctacccag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 194
Length of database: 594
Length adjustment: 8
Effective length of query: 186
Effective length of database: 586
Effective search space: 108996
Effective search space used: 108996
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no233_h03.g1 MSMg01no233_h03.g1 CHROMAT_FILE:
MSMg01no233_h03.g1 PHD_FILE: MSMg01no233_h03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:50:09 2005
(292 letters)
>mm_chr1_58004489_58005183
Length = 695
Score = 553 bits (286), Expect = e-162
Identities = 291/294 (98%), Gaps = 3/294 (1%)
Strand = Plus / Plus
Query: 1 caaatgtcaagtcacattccaggaaggaaggaagagaaacccattcaaataagaaaagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 caaatgtcaagtcacattccaggaaggaaggaagagaaacccattcaaataagaaaagat 260
Query: 61 gaattcttgggaccatagtctctgtttaccctgtctgagactctgaatttatatcttaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaattcttgggaccatagtctctgtttaccctgtctgagactctgaatttatatcttaca 320
Query: 121 aatcagaaggattttttttttt---acacaagttctatgtagcaagattctgctcaaccc 177
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 321 aatcagaaggattttttttttttttacacaagttctatgtagcaagattctgctcaaccc 380
Query: 178 ctgaaaaatggcagttggaatgtggcagctgtaaaggcagaggcagaaaattcttacaaa 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctgaaaaatggcagttggaatgtggcagctgtaaaggcagaggcagaaaattcttacaaa 440
Query: 238 atgaaagaaaatggctgggccaggtaaaaaatgtgcctgctttgtcagagttca 291
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgaaagaaaatggctgggccaggtaaaaaatgtgcctgctttgtcagagttca 494
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 292
Length of database: 695
Length adjustment: 9
Effective length of query: 283
Effective length of database: 686
Effective search space: 194138
Effective search space used: 194138
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
