CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCG
GAATTCAGTCAGCATTCAGATACTGACAATAGTAGTATTTGATTGGCAAA
TTGAAGAATAATTTTCACATCATTACTTATTCCACTGAACTTGCCAGCCC
AAACTGCATGGGACTTGGCAATAGTTCATGAAAATAAAGGAACTCCAAGT
ATATCCAACTTTCAGAAGAACGGTTGAATATATATAGATATTATTATAAA
GTGGAAGGAAAGGTGAAACTAACAAGGACAAATAAATTCTCTGCTATTTC
ACAATGCTAAAAGCAAACATTAATAATATAAAATCAGAAAGTATAATCAA
AGTCAAAGTTTGCCCACAACCTAAAACAAAATCCAGTAAAAATATAAATA
TTCTGTGATAAGAAATTAACCCAAAATAAGAAATATTTTATTATTGTTAT
AAAATAGATAAAAATCTTAGCACAATGAGATGTTTTATTTTTAACCCCAT
CTCTCAAAGACAAGCCAACTCAGAACAGACTCACCTAGAAGTCTGACCAC
CTGCAACCTGCTTCTATGATTAANAGACCTCATCAGTCTGGTTTTATGGT
TTTGAGAGGCAACCAAATGTTCTCAGCAGGAGTGCAGGAGAATAGTGTTT
TTTGTTATCCCATAAACCATTAGCATATTTGCTTACACTTTTCCATTTCA
TCTTATTGCTTACACTTT

CGATTAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTTCAAATACTAAATTCTGTATT
TTCTTCTTGATGTGTATATTTTTAGCTTTGTTACTGACTAGAACTAGATT
TATTTGGGATAAGAAATGACGATTTAGGATATTAAATTAATCCTTAAAAT
AGAATACTTCAAAGAAAAGTATATCCAATGTATGCTTATACTTAGGAAAT
GAATAAAACTATTTTATCATGTATGTGTAAAGCAAAATTCAACATTGCTA
TAGCATAATTTGTCATGTTTGTATTTTAGAATAAAAGATCAAGAGAAAAT
ATAGTTGTTTGTTTTTAATTCACACATTTGTTCTTTAAGGTAACATAGGA
TTGCATACTCAATTAGCACACATTTAATAGGGCTAATTTCAATTGCTTCT
TATGGGAGAGGGCCAGACCAGAAGAGGAGAAATGACTGGACTGTAAGAAA
AACAAAATTAATAAAAGAGGAAATATTTATGGATGCTAACCATTGGCAAT
ATATTGGCAATGTGTTATATATATGTAAATGTTATAAATAATAGTGTATG
TCTGTATACTACATCAAATTTGTTAATAAACCACTTGGACAGGANATAAA
GCATATGGACTTTCCCTTGAAATTTAATCTAGATTCGTTTTCAGGCATGC
CTTTGAAGAGTACTTCCATTN

Query= MSMg01no235_b13.b1 MSMg01no235_b13.b1 CHROMAT_FILE:
MSMg01no235_b13.b1 PHD_FILE: MSMg01no235_b13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:52:19 2005
         (616 letters)



>mm_chr1_50030783_50031798
          Length = 1016

 Score = 1025 bits (530), Expect = 0.0
 Identities = 562/573 (98%)
 Strand = Plus / Minus

                                                                       
Query: 5   gaattcagtcagcattcagatactgacaatagtagtatttgattggcaaattgaagaata 64
           |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 573 gaattcagtcagcatttagatactgacaatagtagtatttgattggcaaattgaagaata 514

                                                                       
Query: 65  attttcacatcattacttattccactgaacttgccagcccaaactgcatgggacttggca 124
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 513 attttcacatcattacttattccactgaacttgccagcccgaactgcatgggacttggca 454

                                                                       
Query: 125 atagttcatgaaaataaaggaactccaagtatatccaactttcagaagaacggttgaata 184
           ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||
Sbjct: 453 atagttcatgaaaataaaggaaccccaagtatatccaactttcagaaggacggttgaata 394

                                                                       
Query: 185 tatatagatattattataaagtggaaggaaaggtgaaactaacaaggacaaataaattct 244
           ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 393 tatatagatattattataaagtggagggaaaggtgaaactaacaaggacaaataaattct 334

                                                                       
Query: 245 ctgctatttcacaatgctaaaagcaaacattaataatataaaatcagaaagtataatcaa 304
           |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 333 ctgctatttcacaatgctaaaagcaaacattaataagataaaatcagaaagtataatcaa 274

                                                                       
Query: 305 agtcaaagtttgcccacaacctaaaacaaaatccagtaaaaatataaatattctgtgata 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 273 agtcaaagtttgcccacaacctaaaacaaaatccagtaaaaatataaatattctgtgata 214

                                                                       
Query: 365 agaaattaacccaaaataagaaatattttattattgttataaaatagataaaaatcttag 424
           |||||||||   ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 213 agaaattaagttaaaataagaaatattttattattgttataaaatagataaaaatcttag 154

                                                                       
Query: 425 cacaatgagatgttttatttttaaccccatctctcaaagacaagccaactcagaacagac 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 153 cacaatgagatgttttatttttaaccccatctctcaaagacaagccaactcagaacagac 94

                                                                       
Query: 485 tcacctagaagtctgaccacctgcaacctgcttctatgattaanagacctcatcagtctg 544
           |||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 93  tcacctggaagtctgaccacctgcaacctgcttctatgattaaaagacctcatcagtctg 34

                                            
Query: 545 gttttatggttttgagaggcaaccaaatgttct 577
           |||||||||||||||||||||||||||||||||
Sbjct: 33  gttttatggttttgagaggcaaccaaatgttct 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 616
Length of database: 1016
Length adjustment: 10
Effective length of query: 606
Effective length of database: 1006
Effective search space:   609636
Effective search space used:   609636
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)

Query= MSMg01no235_b13.g1 MSMg01no235_b13.g1 CHROMAT_FILE:
MSMg01no235_b13.g1 PHD_FILE: MSMg01no235_b13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:52:19 2005
         (620 letters)



>mm_chr1_49894124_49895143
          Length = 1020

 Score = 1108 bits (573), Expect = 0.0
 Identities = 608/620 (98%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttttcaaatactaaattctgtattttcttcttgatgtgtatatttttagctttgttactg 60
           ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 201 ttttcaaatactaaattctgtattttcttcttgatgtgtatatttttagttttgttactg 260

                                                                       
Query: 61  actagaactagatttatttgggataagaaatgacgatttaggatattaaattaatcctta 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 actagaactagatttatttgggataagaaatgacgatttaggatattaaattaatcctta 320

                                                                       
Query: 121 aaatagaatacttcaaagaaaagtatatccaatgtatgcttatacttaggaaatgaataa 180
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 321 aaatagaatacttcaaagaaaagaatatccaatgtatgcttatacttaggaaatgaataa 380

                                                                       
Query: 181 aactattttatcatgtatgtgtaaagcaaaattcaacattgctatagcataatttgtcat 240
           |||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 381 aactatttcatcatgtatgtgtaaagcaaaattcaacattgctatagcataaattgtcat 440

                                                                       
Query: 241 gtttgtattttagaataaaagatcaagagaaaatatagttgtttgtttttaattcacaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtttgtattttagaataaaagatcaagagaaaatatagttgtttgtttttaattcacaca 500

                                                                       
Query: 301 tttgttctttaaggtaacataggattgcatactcaattagcacacatttaatagggctaa 360
           |||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||
Sbjct: 501 tttgttctttaaggtaacataggattgcatactcaattagcatagatttaatagggctaa 560

                                                                       
Query: 361 tttcaattgcttcttatgggagagggccagaccagaagaggagaaatgactggactgtaa 420
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 561 tttcaattgcttcttatgggagagggccggaccagaagaggagaaatgactggactgtaa 620

                                                                       
Query: 421 gaaaaacaaaattaataaaagaggaaatatttatggatgctaaccattggcaatatattg 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gaaaaacaaaattaataaaagaggaaatatttatggatgctaaccattggcaatatattg 680

                                                                       
Query: 481 gcaatgtgttatatatatgtaaatgttataaataatagtgtatgtctgtatactacatca 540
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 681 gcaatgtgttatatatatgtaaatgttacaaataatagtgtatgtctgtatactacatca 740

                                                                       
Query: 541 aatttgttaataaaccacttggacagganataaagcatatggactttcccttgaaattta 600
           ||| ||||||||||||||||||| |||| |||||||||||||||||||||||||||||||
Sbjct: 741 aatgtgttaataaaccacttggagaggaaataaagcatatggactttcccttgaaattta 800

                               
Query: 601 atctagattcgttttcaggc 620
           | ||||||||||||||||||
Sbjct: 801 aactagattcgttttcaggc 820


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 620
Length of database: 1020
Length adjustment: 10
Effective length of query: 610
Effective length of database: 1010
Effective search space:   616100
Effective search space used:   616100
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)