Query= MSMg01no235_m10.b1 MSMg01no235_m10.b1 CHROMAT_FILE:
MSMg01no235_m10.b1 PHD_FILE: MSMg01no235_m10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:11 2005
(315 letters)
>mm_chr1_81550119_81550832
Length = 714
Score = 557 bits (288), Expect = e-163
Identities = 306/312 (98%), Gaps = 1/312 (0%)
Strand = Plus / Minus
Query: 4 ggaattctcacactggcatgggactcctttccatgggactcccttgtcatgggttccccc 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 514 ggaattctcacactggcatgggactcctttccatgggactcccttgtcatgggttcctcc 455
Query: 64 tttccctggttgttctccttctgtttcccccttcttctcatcttctatcatttttttaaa 123
||||||||||||||||||||||||||||||||||||| |||||||||||| | |||||||
Sbjct: 454 tttccctggttgttctccttctgtttcccccttcttcccatcttctatca-tcttttaaa 396
Query: 124 atctcttctcccaacatgaaattaatttctttcatatttttggctgagtagaattgagag 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 395 atctcttctcccaacatgaaattaatttctttcatatttttggctgagtagaattgagag 336
Query: 184 ggcccgccctccttttctcccatttcatcaccagcccaaccttccttccctcttttggtc 243
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 335 ggcccaccctccttttctcccatttcatcaccagcccaaccttccttccctcttttggtc 276
Query: 244 ttcatgaatatatttataagaacagaattaataaaaataaattgatttctccatttaaaa 303
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 275 ttcatgaatatatttataagaacagaattaagaaaaataaattgatttctccatttaaaa 216
Query: 304 aagaaagagttg 315
||||||||||||
Sbjct: 215 aagaaagagttg 204
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 315
Length of database: 714
Length adjustment: 9
Effective length of query: 306
Effective length of database: 705
Effective search space: 215730
Effective search space used: 215730
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no235_m10.g1 MSMg01no235_m10.g1 CHROMAT_FILE:
MSMg01no235_m10.g1 PHD_FILE: MSMg01no235_m10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:11 2005
(286 letters)
>mm_chr1_81384293_81384983
Length = 691
Score = 495 bits (256), Expect = e-144
Identities = 280/290 (96%), Gaps = 7/290 (2%)
Strand = Plus / Plus
Query: 2 tcccc-aagtgctcttattcatttaaacaggccattaacattaagg-cttcctgagatct 59
||||| ||||||||||||||||||||||||||||||||||| | || |||||||||||||
Sbjct: 202 tccccaaagtgctcttattcatttaaacaggccattaacatca-ggacttcctgagatct 260
Query: 60 gaaattgtttattttacttaaataaacatttattctgcttgaataaacgtagaaaaacaa 119
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gaaattgtttattttacttaaataaacatttattctgcttgaataaacgtagaaaaacaa 320
Query: 120 agattaatcctatttgaataaacactccattctctttt----gtctcctcaaagcaatgc 175
||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 321 agactaatcctatttgaataaacactccattctcttttatttgtctcctcaaagcaatgc 380
Query: 176 agaggatacttcaaaatgtgttttagatgagtgcacacacaaccccagtaggaatatgtt 235
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agaggatatttcaaaatgtgttttagatgagtgcacacacaaccccagtaggaatatgtt 440
Query: 236 acatatgtgtgcacattagtgcatatgtatctatgcacaaatgcaattat 285
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 acatatgtgtgcacattagtgcatatgtatctatgcacaaatgcaattat 490
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 691
Length adjustment: 9
Effective length of query: 277
Effective length of database: 682
Effective search space: 188914
Effective search space used: 188914
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
