Query= MSMg01no236_e06.b1 MSMg01no236_e06.b1 CHROMAT_FILE:
MSMg01no236_e06.b1 PHD_FILE: MSMg01no236_e06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:47 2005
(674 letters)
>mm_chr1_44681290_44682363
Length = 1074
Score = 462 bits (239), Expect = e-134
Identities = 303/327 (92%), Gaps = 8/327 (2%)
Strand = Plus / Minus
Query: 5 gaattctcctcacagatatccttctactgaaaagcaacacaaattactttcatgtgagca 64
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 322 gaattctcctcacagatatccttctactgaaaagcaacacaaattcctttcatgtgagca 263
Query: 65 gagcatcttttggagatgttcgtaggtgctaatttacaataggtttgctgtaatgattaa 124
|||||||||||||||| ||| || ||||||||||||||||||||||||||||||||||||
Sbjct: 262 gagcatcttttggagaagtttgtgggtgctaatttacaataggtttgctgtaatgattaa 203
Query: 125 ttttaacccagaattcctcccatctaaaataaatacagggacaaagagtgaagcagagac 184
|||||||||||||||| |||||||||||| |||||| |||||||| |||| |||||||||
Sbjct: 202 ttttaacccagaattcttcccatctaaaagaaatacggggacaaaaagtggagcagagac 143
Query: 185 taaagaaaaggccatccagagactgccctacct--ggaaattcatcctat-attcagaca 241
| ||| |||||||||||| |||||||||||||| ||| ||| |||||| || ||||||
Sbjct: 142 tgaaggaaaggccatccaaagactgccctacctaggga--ttcgtcctattatgcagaca 85
Query: 242 ccaccaaacccagacactattgctgatgccaagaagtgcttactgaaagaagcctgatat 301
||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 84 cca---aacccagacactattgctgatgccaagaagtgcttactgacagaagcctgatat 28
Query: 302 agctgtctcctgagagtctctgccaga 328
|||||| ||||||||||||||||||||
Sbjct: 27 agctgtttcctgagagtctctgccaga 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 674
Length of database: 1074
Length adjustment: 10
Effective length of query: 664
Effective length of database: 1064
Effective search space: 706496
Effective search space used: 706496
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no236_e06.g1 MSMg01no236_e06.g1 CHROMAT_FILE:
MSMg01no236_e06.g1 PHD_FILE: MSMg01no236_e06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:53:47 2005
(652 letters)
>mm_chr1_44642290_44643341
Length = 1052
Score = 1230 bits (636), Expect = 0.0
Identities = 648/652 (99%)
Strand = Plus / Plus
Query: 1 cttgggttttattcatgtgattcggtgtgaattcacagttaggatgttgtgggatctttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttgggttttattcatgtgattcggtgtgaattcacagttaggatgttgtgggatctttg 260
Query: 61 tgtctctgttccgttgcctgtcataaaccccatgttacaaagtggtatcacacttgctgt 120
|||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||
Sbjct: 261 tgtctctgttccgttgcctgtcataagctccatgttacaaagtggtatcacacttgctgt 320
Query: 121 ggacagtcttggaatatggctaataagatgtttagttgcagggacatttattatggattt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ggacagtcttggaatatggctaataagatgtttagttgcagggacatttattatggattt 380
Query: 181 agtcctttgttgtcctgtgaatcacctgaaataccaattttggaagtgaaaaaatggaat 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agtcctttgttgtcctgtgaatcacctgaaataccaattttggaagtgaaaaaatggaat 440
Query: 241 atgagcaattctatgtgattgtgaatacttaatctgtagtgtttgctgtactaatagagt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgagcaattctatgtgattgtgaatacttaatctgtagtgtttgctgtactaatagagt 500
Query: 301 ttattttctgcaggggcttcctactgttcctgttgtttccatgtgagcctctgcatccag 360
|||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||
Sbjct: 501 ttattttctgcaggggcttcctactgttcctgttatttccatgtgagactctgcatccag 560
Query: 361 acgatgagtggtcaatgtacaaacagaggaccctcagtcagagaatctgtggtcagcatc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acgatgagtggtcaatgtacaaacagaggaccctcagtcagagaatctgtggtcagcatc 620
Query: 421 aagtgggcatggaggaaactttaccattgctaatagaggatgagcagaattacagagtta 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 aagtgggcatggaggaaactttaccattgctaatagaggatgagcagaattacagagtta 680
Query: 481 ggagaagcacatctagtttattaattatctaaaaacattaatgattctcctgggttgtta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ggagaagcacatctagtttattaattatctaaaaacattaatgattctcctgggttgtta 740
Query: 541 ttatctttaggagaaattatttcaatttgttttatttggcatttaattgcctccttccac 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ttatctttaggagaaattatttcaatttgttttatttggcatttaattgcctccttccac 800
Query: 601 ctctgcctttttctgctggagattgaatctacttgggaggaaagaaagaaag 652
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ctctgcctttttctgctggagattgaatctacttgggaggaaagaaagaaag 852
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 652
Length of database: 1052
Length adjustment: 10
Effective length of query: 642
Effective length of database: 1042
Effective search space: 668964
Effective search space used: 668964
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
