TCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAAGAAGATCCGCGGA
ATTCACAGATGTTCCAAATACTTATATTCAATGATTTGGAACACAGATAT
CCATTATGTGAATCACTTACTCATCATGTAATTGAACTGATCAATGTTTA
AAACAATCACTGGAGAATTAACATATAATTGCTTAGAATATACAGAGAAG
ATAATCAGCTGTGTTATCAATATTCAGCAATTACTCATTCAGCCAGGGAG
TATCTCTTTCACAAAGCTAAACCTGGAAAATGATTTTCTGTCTTAGACTA
GTATGTCTGGTCCATATTATCTTCAACAAACATGGAAGTATAGATAAGCT
TAAAATTTGAGTGTGCCAACTGAACCTAAGAATCTCAGTGCAGTCCTTCT
CTTTGTAGTTTTGAATTTGTTCTAATACAGAGGATTTGCCTACTAAAATT
CTAGAAATATTTTCATTGTATTCAATTAAGACAATACCATTGTAAAAGTA
CACCATATGCTTGTACGGAAATTATTTGGGTGATGAGTAATAAAAACAAT
ATTCTCAATTCATTTACCTATCTGTTATCCTTACAGAACAAATGAGCATA
ACTGAAAATATGTGTAAATTTCTATCCTATAACGATTCTGAAAATCTTTA
TCATACCTTAATATCCTCACCAACAATAAACAAACAAGCAAACATGAAGG
GAAGGAAATGGATTCTAACAATAGTTGAAGAA

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTCAGTTCTAAGCCCCATTT
TTAATGGGGTTATTTGATTTTCTCAAGTCCACCTTCTTGAGTTCTTTATA
TATGTTGGATATTAGGGATGCTCACAGTCAGCTAATGGATGGATCACAGG
GCTCCCAATGGAGGAGCTAGAGAAAGTACCCAAGGAGCTAAAGGGATCTG
CAACCCTATAGGTGGAAGAACATTATGAACTAACCAGTACCCCGGAGCTC
TTGACTCTAGCTGCATATGTATCAAAAGATGGCCTAGTCGGCCATCACTG
GAAAGAGAGGTTTTTTGGACACCCACACTTTATATGCCCCAGTACAGGGG
AACGCCAGGGCCAAAAAGGGGGAGTGGATGGGTAGGGGATTGGGGGTGGT
TTTACAAACTCCATTTTTAACCCATTTTTTCTTTCTTACCTAATCAGTTT
CTTTTATTCTAACGGTCCTTTTCTCCCCTCTCGCCCCAAACCCCCAAATA
TCACACCGCTTTCTTACTCAACCCACTTTTTCCTATATTATTATTTCGAT
CCCCTTTTCACTCTTCTTCTCTCTTTTCCCGATTCCCGGTTCCATCATTT
TCCTTCTTCATTTCTCCCCCTTTTTCTATTTACCTCCCCCCCATTTACTT
TCACCCCTCCTATTAATCCGTTGCGAATCCCCGCCCTATCCTTTTGATAT
TTC

Query= MSMg01no236_k05.b1 MSMg01no236_k05.b1 CHROMAT_FILE:
MSMg01no236_k05.b1 PHD_FILE: MSMg01no236_k05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:15 2005
         (662 letters)



>mm_chr1_67771944_67773005
          Length = 1062

 Score = 1265 bits (654), Expect = 0.0
 Identities = 660/662 (99%)
 Strand = Plus / Minus

                                                                       
Query: 1   cttatattcaatgatttggaacacagatatccattatgtgaatcacttactcatcatgta 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 862 cttatattcaatgatttggaacacagatatccattatgtgaatcacttactgatcatgta 803

                                                                       
Query: 61  attgaactgatcaatgtttaaaacaatcactggagaattaacatataattgcttagaata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 802 attgaactgatcaatgtttaaaacaatcactggagaattaacatataattgcttagaata 743

                                                                       
Query: 121 tacagagaagataatcagctgtgttatcaatattcagcaattactcattcagccagggag 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 742 tacagagaagataatcagctgtgttatcaatattcagcaattactcattcagccagggag 683

                                                                       
Query: 181 tatctctttcacaaagctaaacctggaaaatgattttctgtcttagactagtatgtctgg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 tatctctttcacaaagctaaacctggaaaatgattttctgtcttagactagtatgtctgg 623

                                                                       
Query: 241 tccatattatcttcaacaaacatggaagtatagataagcttaaaatttgagtgtgccaac 300
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 tccatattaccttcaacaaacatggaagtatagataagcttaaaatttgagtgtgccaac 563

                                                                       
Query: 301 tgaacctaagaatctcagtgcagtccttctctttgtagttttgaatttgttctaatacag 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 tgaacctaagaatctcagtgcagtccttctctttgtagttttgaatttgttctaatacag 503

                                                                       
Query: 361 aggatttgcctactaaaattctagaaatattttcattgtattcaattaagacaataccat 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 aggatttgcctactaaaattctagaaatattttcattgtattcaattaagacaataccat 443

                                                                       
Query: 421 tgtaaaagtacaccatatgcttgtacggaaattatttgggtgatgagtaataaaaacaat 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tgtaaaagtacaccatatgcttgtacggaaattatttgggtgatgagtaataaaaacaat 383

                                                                       
Query: 481 attctcaattcatttacctatctgttatccttacagaacaaatgagcataactgaaaata 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 attctcaattcatttacctatctgttatccttacagaacaaatgagcataactgaaaata 323

                                                                       
Query: 541 tgtgtaaatttctatcctataacgattctgaaaatctttatcataccttaatatcctcac 600
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 tgtgtaaatttctatcctataacgattctgaaaatctttatcataccttaatatcctcac 263

                                                                       
Query: 601 caacaataaacaaacaagcaaacatgaagggaaggaaatggattctaacaatagttgaag 660
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 caacaataaacaaacaagcaaacatgaagggaaggaaatggattctaacaatagttgaag 203

             
Query: 661 aa 662
           ||
Sbjct: 202 aa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space:   685904
Effective search space used:   685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)