Query= MSMg01no236_l22.b1 MSMg01no236_l22.b1 CHROMAT_FILE:
MSMg01no236_l22.b1 PHD_FILE: MSMg01no236_l22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:23 2005
(322 letters)
>mm_chr1_99772280_99773000
Length = 721
Score = 532 bits (275), Expect = e-155
Identities = 309/321 (96%), Gaps = 3/321 (0%)
Strand = Plus / Minus
Query: 4 ggaattcctgatgagttctcccagtcaggaagcaaaagatgttcataaacagtgtaattt 63
|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||
Sbjct: 454 ggaattcctgatgagtacttccagtcaggaagcaaaagatgttcataaacagtgtaattt 395
Query: 64 ggaatttgtgctctttacccagagaagggaaaattcagtgttttggattgagagaacgat 123
||||||||||||| || |||||||||||| |||||||||||||||||||||||||||
Sbjct: 394 ggaatttgtgctcactaaagagagaagggaaagttcagtgttttggattgagagaacgat 335
Query: 124 tatggaaaaatatataaaaatggaaaaaagaaaaataattcaattttagagatgttatgt 183
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 334 tatggaaaaa-atataaaaatggaaaaaagaaaaataattcaattttagagatgttatgt 276
Query: 184 ttctaatatcagggaaaacaccatcaaaatagaaatactcagaatatgggatttttttaa 243
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 275 ttctaatatcagggaaaacaccatcaaaatagaaattctcagaatatgggatttttttaa 216
Query: 244 agatatcaaaaa--gtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcatat 301
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 215 agatatcaaaaagtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgcatat 156
Query: 302 atgtgtgcatgtgtgtgcagg 322
|||||||||||||||||||||
Sbjct: 155 atgtgtgcatgtgtgtgcagg 135
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 45
Number of extensions: 17
Number of successful extensions: 16
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 721
Length adjustment: 9
Effective length of query: 313
Effective length of database: 712
Effective search space: 222856
Effective search space used: 222856
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no236_l22.g1 MSMg01no236_l22.g1 CHROMAT_FILE:
MSMg01no236_l22.g1 PHD_FILE: MSMg01no236_l22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:23 2005
(352 letters)
>mm_chr1_99612599_99613350
Length = 752
Score = 658 bits (340), Expect = 0.0
Identities = 349/352 (99%)
Strand = Plus / Plus
Query: 1 actaattgtattttttaaaaaaataattgtataaactgatcacttaaggaatcagaattt 60
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 actaattgtatttttaaaaaaaataattgtataaactgatcacttaaggaatcagaattt 260
Query: 61 tcagctgttaatttagaattaaactaatcattactgtggtcattagacgatctgacaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcagctgttaatttagaattaaactaatcattactgtggtcattagacgatctgacaagt 320
Query: 121 aatgttcaattattgtggaaattacggcagaaaagggatcaagacagtatcagtggtttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aatgttcaattattgtggaaattacggcagaaaagggatcaagacagtatcagtggtttg 380
Query: 181 gtacattagttggaattgtatgccaactaaaattaaagattggtaagttaggtgatactg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 gtacattagttggaattgtatgccaactaaaattaaagattggtaagttaggtgatactg 440
Query: 241 tgtaccccacattttgaaataaaaaaaaattaataagggatgaagcagggagtatctttt 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 441 tgtaccccacattttgaaataaaaaaaaattaaaaagggatgaagcagggagtatctttt 500
Query: 301 ataataaaaagcaaacgtaccattggttgggtgtcgagcaaatgagatagaa 352
| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 aaaataaaaagcaaacgtaccattggttgggtgtcgagcaaatgagatagaa 552
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 352
Length of database: 752
Length adjustment: 9
Effective length of query: 343
Effective length of database: 743
Effective search space: 254849
Effective search space used: 254849
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
