Query= MSMg01no237_c19.b1 MSMg01no237_c19.b1 CHROMAT_FILE:
MSMg01no237_c19.b1 PHD_FILE: MSMg01no237_c19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:55 2005
(531 letters)
>mm_chr1_58303247_58304178
Length = 932
Score = 1013 bits (524), Expect = 0.0
Identities = 530/532 (99%), Gaps = 1/532 (0%)
Strand = Plus / Minus
Query: 1 tggctctatgtcatcataagcaatcttcactcgtttagctgcttcttttgcatggatgta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 908 tggctctatgtcatcataagcaatcttcactcgtttagctgcttcttttgcatggatgta 849
Query: 61 agtatcagcagccacggtgcagatgatctgacccacgcaaatgacctgtagaaaagccgt 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 848 ggtatcagcagccacggtgcagatgatctgacccacgcaaatgacctgtagaaaagccgt 789
Query: 121 gtgccattagttagaacacagactcgggctagggatgtggctcagttggcatggtgcttg 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 788 gtgccattagttagaacacagactcgggctagggatgtggctcagttggcatggtgcttg 729
Query: 181 cctagcatacataatgccctgggttagcatcacatgaactggggatgtgaacctcatggt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 728 cctagcatacataatgccctgggttagcatcacatgaactggggatgtgaacctcatggt 669
Query: 241 tacatgatgagttcaaggccagcctgggatacaggctgtcttaaaacaaaggcaaaaaat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 668 tacatgatgagttcaaggccagcctgggatacaggctgtcttaaaacaaaggcaaaaaat 609
Query: 301 aaaacagaatatcccaaaagcaattagcaattactgctctcacattcttatattactcac 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 608 aaaacagaatatcccaaaagcaattagcaattactgctctcacattcttatattactcac 549
Query: 361 tgatgctttgatgaccagaaggaagaccattctct-ccccccaccctttcttcctttctt 419
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 548 tgatgctttgatgaccagaaggaagaccattctctcccccccaccctttcttcctttctt 489
Query: 420 ttggtttttcaggacaaggtttttctttacaccaggctatcttagaactcagggatctac 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 ttggtttttcaggacaaggtttttctttacaccaggctatcttagaactcagggatctac 429
Query: 480 ctatctttgcttcctgagtgctgggatcaaagatatgtgtgactgcacctgg 531
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ctatctttgcttcctgagtgctgggatcaaagatatgtgtgactgcacctgg 377
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 531
Length of database: 932
Length adjustment: 10
Effective length of query: 521
Effective length of database: 922
Effective search space: 480362
Effective search space used: 480362
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no237_c19.g1 MSMg01no237_c19.g1 CHROMAT_FILE:
MSMg01no237_c19.g1 PHD_FILE: MSMg01no237_c19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:55 2005
(232 letters)
>mm_chr1_58142288_58142920
Length = 633
Score = 400 bits (207), Expect = e-116
Identities = 225/231 (97%), Gaps = 1/231 (0%)
Strand = Plus / Plus
Query: 1 tcagtagccatgggacaggtcagtgcttcaaacacatgcgggaatgtcacctggcagaag 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 tcagtagccatgggacaggtcagtgcttcaaacacatgtgggaatgtcacctggcagaag 260
Query: 61 cctggttgaattagctacatgatggccctgcccaggttgtgcatggcaaagcctgtacta 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cctggttgaattagctacatgatggccctgcccaggttgtgcatggcaaagcctgtacta 320
Query: 121 ctctaggacaaaagaagaactcctctgcacagcccaggggcattttaacagttagataga 180
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctctaggacacaagaagaactcctctgcacagcccaggggcattttaacagttagataga 380
Query: 181 aacattcttggtgttaaatggggagggggagg-acctgtgatttattcctg 230
||||||||||||| |||||||||||||| || ||||||||||||||||||
Sbjct: 381 aacattcttggtgggaaatggggagggggggggacctgtgatttattcctg 431
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 232
Length of database: 633
Length adjustment: 9
Effective length of query: 223
Effective length of database: 624
Effective search space: 139152
Effective search space used: 139152
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
