Query= MSMg01no237_d02.b1 MSMg01no237_d02.b1 CHROMAT_FILE:
MSMg01no237_d02.b1 PHD_FILE: MSMg01no237_d02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:57 2005
(648 letters)
>mm_chr1_68963332_68964379
Length = 1048
Score = 1253 bits (648), Expect = 0.0
Identities = 648/648 (100%)
Strand = Plus / Plus
Query: 1 catctctgggcaatatggtccagagaacactaactcataatgtctgccatcctcccttta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catctctgggcaatatggtccagagaacactaactcataatgtctgccatcctcccttta 260
Query: 61 agtaccagcagaatttgtatctgtcacaaagtgcttatcggtttaggaggaaccatgtat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 agtaccagcagaatttgtatctgtcacaaagtgcttatcggtttaggaggaaccatgtat 320
Query: 121 aactaatagaaaagaagataatttttaatcaaaagcaagcttatagatggtcaagaaata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 aactaatagaaaagaagataatttttaatcaaaagcaagcttatagatggtcaagaaata 380
Query: 181 aatgcaaattatatgatttatctttccttagaaatagatatttaatataaactctgacct 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 aatgcaaattatatgatttatctttccttagaaatagatatttaatataaactctgacct 440
Query: 241 aataatgaggtcagagttaatatgagggcttttcagtttgtcttttttatgtatttatgt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aataatgaggtcagagttaatatgagggcttttcagtttgtcttttttatgtatttatgt 500
Query: 301 atcatctatctatctatgtatctatctatctatctatctatctatctatgtatctatcta 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atcatctatctatctatgtatctatctatctatctatctatctatctatgtatctatcta 560
Query: 361 tctacctgtctatctacctactatagctatctatatctatctttctatcacttatctaaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tctacctgtctatctacctactatagctatctatatctatctttctatcacttatctaaa 620
Query: 421 attcttagagcataaccatgttaatacatgttaacattcatgatgagctaaaaccaaact 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 attcttagagcataaccatgttaatacatgttaacattcatgatgagctaaaaccaaact 680
Query: 481 gggggatttgcttaaaaccagacagagctgttttgagatcttggcatgtgactgtgagcc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 gggggatttgcttaaaaccagacagagctgttttgagatcttggcatgtgactgtgagcc 740
Query: 541 aaaacacagaaaaggcacagtgctcctgtgaaacttcaggtaaattggcttgatattaaa 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aaaacacagaaaaggcacagtgctcctgtgaaacttcaggtaaattggcttgatattaaa 800
Query: 601 gtccagaatttctaataacctggaaaaggaggctgaaacactgatcaa 648
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gtccagaatttctaataacctggaaaaggaggctgaaacactgatcaa 848
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 3
Number of HSP's successfully gapped: 1
Length of query: 648
Length of database: 1048
Length adjustment: 10
Effective length of query: 638
Effective length of database: 1038
Effective search space: 662244
Effective search space used: 662244
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no237_d02.g1 MSMg01no237_d02.g1 CHROMAT_FILE:
MSMg01no237_d02.g1 PHD_FILE: MSMg01no237_d02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:54:57 2005
(651 letters)
>mm_chr1_68995965_68997014
Length = 1050
Score = 717 bits (371), Expect = 0.0
Identities = 374/375 (99%), Gaps = 1/375 (0%)
Strand = Plus / Minus
Query: 5 gaattcaatgtctaataatttgaagcctgctaaataattttgaccagctcctgcctatgg 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 gaattcaatgtctaataatttgaagcctgctaaataattttgaccagctcctgcctatgg 315
Query: 65 tattagaagaacaacagtcactttggggttgtcagaacatttctagcataagagtaagtg 124
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 tattagaagaacaacagt-actttggggttgtcagaacatttctagcataagagtaagtg 256
Query: 125 acataacctgatcagctatctcattcacccaggtgtgagatatttgattaattttttatt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 255 acataacctgatcagctatctcattcacccaggtgtgagatatttgattaattttttatt 196
Query: 185 aatcattttattcatttacatttcaaattgtatctcccttcctggttacgcctccataat 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 195 aatcattttattcatttacatttcaaattgtatctcccttcctggttacgcctccataat 136
Query: 245 gttcacccatcctatcacccctctcctccctctcctttgtctctattagggtactcctcc 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 135 gttcacccatcctatcacccctctcctccctctcctttgtctctattagggtactcctcc 76
Query: 305 acccactcacccactcctgcttcacccctctagcatctccctatggtcccattgatggca 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 75 acccactcacccactcctgcttcacccctctagcatctccctatggtcccattgatggca 16
Query: 365 gacaatgtcatcctc 379
|||||||||||||||
Sbjct: 15 gacaatgtcatcctc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 651
Length of database: 1050
Length adjustment: 10
Effective length of query: 641
Effective length of database: 1040
Effective search space: 666640
Effective search space used: 666640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
