TXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTCACCTGATGCCTACCGAATGGCAGAGAAGCACCTGAAAAAATGTTCAA
CATCCTTAATCATCAGGGAAATGCAAATCAAAACAACCCTGAGATTCCAC
CTCACACCAGTCAGAATGGCTAAGATCAAAAATTCAGGTGACAGCAGATG
CTGGCGTGGATGTGGAGAAAGAGGAACACTCCTCCATTGTTTGTGGGATT
GCAGGCTTGTACAACCACTCTGGAAATCAGTCTGGCGGTTCCTCAGGAAA
TTGGACATAGTACTACTGGAGGATCCAGCAATACCTCTCCTGGGCATATA
TCCAGAAGATGCCCCAACTGGTAAGAAGGACACATGCTCCACTATGTTCA
TAGCAGCCTTATTTATAATAGCCAGAAGCTGGAAAGAACCCAGATGCCCC
TCAACAGAGGAATGGATACAGAAAATGTGGTACATCTACACAATGGAGTA
CTACTCAGCTATTAAAAAGAATGAATTTATGAAATTCCTAGCCAAATGGA
TGGACCTGGAGGGCATCATCCTGAGTGAGGTAACACATTCACAAAGAAAC
TCACACAATATGCACTCACTGATAAGTGGATATTAGCCCAAAACCTAGGA
TACCCAAGATATAAGATACAATTTCCTAAACACATGAAACTCAAGAAAAA
TGAAGACTGAAGTGTGGACACTATGCCCCTCCTTAGAAGTGGGAACAAAA
CACCCTTGGAA

NTCGATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXAATGTGTGACCCAGGCTAGCCTCTT
AACTAACCACCCATTTTATTTCACCTACACAGTGCTGAAATTACAGATGT
ATTCCCACCACTTCTGATGTAAACTATAATTTTTGGGTGTGTGTGCATAT
ATATATGCACGCACGCACACACACACACACACACACACACACTCATATAA
TATGTGTACAGATGCCCATGTGTTTTGGGGCACAATCACATGTCAATATG
GAGGGCAGAGGAAAACTTCTAGTGTTATTCTCTAGACACTGTCCAAATTT
TTCCTTTAAAATGTTGTATTTATTTATTTGCATGTGTATGGGGTTTTGTC
TGCAGTGCCATATGCATGCCCAGCGTTCATGTATTCCAGAAGGGGACATT
GGATCCCATGAAACTGGTGTTGCAATGTTTGTGAGCTGCCAGGGTGCTGA
GAATCGAACCCCTGTCCTCTGGAAGAACCCAGTGCTCTTAACCATTTAGC
CATTTCTCCAGTGCCCCCTCCCCTTGTTTGCGATAGTTCTCTCTCAACTG
GCCTGCTACTTGCCAAATAACGTTGCTGTCTATCCACCCTATGTTTCCTA
GAGCCTCTGTCTCTTTCTTATTGCTCGCATGTATGTACCCGTCTTTCCAC
TGTTTTATTTTAATCGACCATCGCA

Query= MSMg01no261_e13.g1 MSMg01no261_e13.g1 CHROMAT_FILE:
MSMg01no261_e13.g1 PHD_FILE: MSMg01no261_e13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:57:38 2005
         (508 letters)



>mm_chr1_63703873_63704780
          Length = 908

 Score =  899 bits (465), Expect = 0.0
 Identities = 490/505 (97%), Gaps = 12/505 (2%)
 Strand = Plus / Minus

                                                                       
Query: 1   aatgtgtgacccaggctagcctcttaactaaccacccattttatttcacctacacagtgc 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 652 aatgtgtgacccaggctagcctcttaactaaccacccattttatttcacctacacagtgc 593

                                                                       
Query: 61  tgaaattacagatgtattcccaccacttctgatgtaaactataatttttgggtgtgtgtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 592 tgaaattacagatgtattcccaccacttctgatgtaaactataatttttgggtgtgtgtg 533

                                                                       
Query: 121 catatatatatgcacgcacgcacacacacacacacacacacacacactcatataatatgt 180
           |||||||||||  | |||||          ||||||||||||||||||||||||||||||
Sbjct: 532 catatatatat--atgcacg----------cacacacacacacacactcatataatatgt 485

                                                                       
Query: 181 gtacagatgcccatgtgttttggggcacaatcacatgtcaatatggagggcagaggaaaa 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 484 gtacagatgcccatgtgttttggggcacaatcacatgtcaatatggagggcagaggaaaa 425

                                                                       
Query: 241 cttctagtgttattctctagacactgtccaaatttttcctttaaaatgttgtatttattt 300
           |||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 424 cttcaagtgttattctctagacactgtccaaatttttcctttaaaatgttgtatttattt 365

                                                                       
Query: 301 atttgcatgtgtatggggttttgtctgcagtgccatatgcatgcccagcgttcatgtatt 360
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 364 atttgcatgtgtatggggttttgtctgcagtgccatatgcatgcccagtgttcatgtatt 305

                                                                       
Query: 361 ccagaaggggacattggatcccatgaaactggtgttgcaatgtttgtgagctgccagggt 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ccagaaggggacattggatcccatgaaactggtgttgcaatgtttgtgagctgccagggt 245

                                                                       
Query: 421 gctgagaatcgaacccctgtcctctggaagaacccagtgctcttaaccatttagccattt 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 244 gctgagaatcgaacccctgtcctctggaagaacccagtgctcttaaccatttagccattt 185

                                    
Query: 481 ctccagtgccccctccccttgtttg 505
           |||||||||||||||||||||||||
Sbjct: 184 ctccagtgccccctccccttgtttg 160


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 908
Length adjustment: 10
Effective length of query: 498
Effective length of database: 898
Effective search space:   447204
Effective search space used:   447204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)