Query= MSMg01no262_c02.b1 MSMg01no262_c02.b1 CHROMAT_FILE:
MSMg01no262_c02.b1 PHD_FILE: MSMg01no262_c02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:41 2005
(662 letters)
>mm_chr1_71721780_71722841
Length = 1062
Score = 824 bits (426), Expect = 0.0
Identities = 461/480 (96%), Gaps = 13/480 (2%)
Strand = Plus / Minus
Query: 1 tggaaattttgaccccagggatatggctttgaggcagtcaaaaccaaacagctcctccta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 467 tggaaattttgaccccagggatatggctttgaggcagtcaaaaccaaacagctcctccta 408
Query: 61 gttgtcatggaggggatgacactatcaactcaagagtttctgcagagtctaactaaaaga 120
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 407 gttgtcatggaggggatgacactatcaactcaagagtttctgcggagtctaactaaaaga 348
Query: 121 cgttaagagccagtcacaagttctgaccactgtcgcttgaagggctgtacatgaaggtta 180
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 347 cgttaagagccagtcacaagttctgaccactgtcacttgaagggctgtacatgaaggtta 288
Query: 181 cctcatccatgcaggcaaccagaagctatagttgattcaaaaattatggccagttcacta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 287 cctcatccatgcaggcaaccagaagctatagttgattcaaaaattatggccagttcacta 228
Query: 241 catccagtcaacttagtaactattcatcgttagcatttcttctaagctctgccccacagt 300
||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||
Sbjct: 227 catccagtcaacttagtaactattcattgtt-----ttcttctaagctctgccccacagt 173
Query: 301 tactggcagcagtcaggtgtgcctgactcactataaaaggggctgtttgccctctcttca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 172 tactggcagcagtcaggtgtgcctgactcactataaaaggggctgtttgccctctcttca 113
Query: 361 ctctcttattctcttgctctcttgctcttttaccctcttccccacctctgttccttcttt 420
|||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 112 ctctcttattctcttgctct--------tttaccctcttccccacctctgttccttcttt 61
Query: 421 ctccccattttcctcccaattctctctacttgctagcctcccctcctcctcctcttcctc 480
||||||||| ||||||||| ||| ||||||||||||||||||||||||||||||||||||
Sbjct: 60 ctccccattctcctcccaactctttctacttgctagcctcccctcctcctcctcttcctc 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 662
Length of database: 1062
Length adjustment: 10
Effective length of query: 652
Effective length of database: 1052
Effective search space: 685904
Effective search space used: 685904
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no262_c02.g1 MSMg01no262_c02.g1 CHROMAT_FILE:
MSMg01no262_c02.g1 PHD_FILE: MSMg01no262_c02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:42 2005
(599 letters)
>mm_chr1_71572483_71573481
Length = 999
Score = 1120 bits (579), Expect = 0.0
Identities = 594/599 (99%)
Strand = Plus / Plus
Query: 1 catacataaagcagtaagatttctaacatttatttatcaaagtcgtttctcaaggaggtt 60
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 201 catacataaagcagtaagatttctaacatttatttatcaaagttgtttctcaaggaggtt 260
Query: 61 tgggaatttttgtgtggatattgtaggtgcctctgtgtgtgtttggcttgatttggtttg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tgggaatttttgtgtggatattgtaggtgcctctgtgtgtgtttggcttgatttggtttg 320
Query: 121 ggtagtgctggggtttgaagccagggcctcatgcctgccaagcaagcactcttccactgg 180
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 321 ggtagtgctggggtttgaagccagggcctcatgcctgccaggcaagcactcttccactgg 380
Query: 181 agccacagccccatctggagatagttcttaaccatcttgcccatttgaaactcttacaca 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 381 agccacagccccatctggagatagttcttaactatcttgcccatttgaaactcttacaca 440
Query: 241 ttcaggcaaaaagagactttgcccacatatcacgcagttttctaagtcacaacctgtact 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 441 ttcaggcaaaaagagactttgcccacatatcacacagttttctaagtcacaacctgtact 500
Query: 301 cctgtctggtacacgaagccaaatcctgttattccttccgtttatttgttcctttggtaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cctgtctggtacacgaagccaaatcctgttattccttccgtttatttgttcctttggtaa 560
Query: 361 tactctgacaattttatttctgaggtctcacttgttacacatttccatagtttgcatcca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tactctgacaattttatttctgaggtctcacttgttacacatttccatagtttgcatcca 620
Query: 421 caaaaatgattctttccaggcctaatttcagtattgttctctcaaaaaacaataggaata 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caaaaatgattctttccaggcctaatttcagtattgttctctcaaaaaacaataggaata 680
Query: 481 ctgaacttttaaaatcatttgccaaattttccacttcctggtcccacagtgattatggtc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 ctgaacttttaaaatcatttgccaaattttccacttcctggtcccacagtgattatggtc 740
Query: 541 aatacccccatagagtagccgcgctcgctcctcatgagttctggaaggcgatgatgcaa 599
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 741 aatacccccatagagtagccacgctcgctcctcatgagttctggaaggcgatgatgcaa 799
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 599
Length of database: 999
Length adjustment: 10
Effective length of query: 589
Effective length of database: 989
Effective search space: 582521
Effective search space used: 582521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
