Query= MSMg01no262_f05.b1 MSMg01no262_f05.b1 CHROMAT_FILE:
MSMg01no262_f05.b1 PHD_FILE: MSMg01no262_f05.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:57 2005
(580 letters)
>mm_chr1_188065562_188066541
Length = 980
Score = 1077 bits (557), Expect = 0.0
Identities = 574/580 (98%)
Strand = Plus / Plus
Query: 1 gacggtctagtcaaatgcttagttagcattctgttaatctgtatgacagttttgtgggtt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 gacggtctagtcaaatgcttagttagcattctgttaatctgtatgacagttttgtgggtt 260
Query: 61 tcttatttttaatatcagtagaaaaggaaataaatgggaccctgagattatcattatcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcttatttttaatatcagtagaaaaggaaataaatgggaccctgagattatcattatcag 320
Query: 121 agaatactggaggttaaaaggtcctgttaatactaagagaagatttaaagatttaatata 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agaatactggaggttaaaaggtcctgttaatactaagagaagatttaaagatttaatata 380
Query: 181 actaaatatgttcttattatgctttctttagccaaggcattctttgattttaaaagtctg 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 actaaatatgttcttattatgctttctttagccaaggcattctttgattttaaaagtctg 440
Query: 241 tactggttttgacaccagcttgtcaccggaagtaccccactacttcctataatcctttaa 300
||||||||||| ||||||||||||||||||||||||| |||||||||||||||| |||||
Sbjct: 441 tactggttttggcaccagcttgtcaccggaagtaccctactacttcctataatcttttaa 500
Query: 301 gacatgaagaaataacttgagctgtttgcagaagttgggagaaaatgaggggtcccgaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gacatgaagaaataacttgagctgtttgcagaagttgggagaaaatgaggggtcccgaca 560
Query: 361 tcaatagagggagcaccacctctcagcatccagtggaaaaaatcctgacttcctccagta 420
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 561 tcaatagagggagcaccacctctcagcatccagtggaagaaatcctgacttcctccagta 620
Query: 421 gacccaaggacagagaaacaaaactctttccccgacagggttgtatttagtagttcttga 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 gacccaaggacagagaaacaaaactctttccccgacagggttgtatttagtagttcttga 680
Query: 481 atattccatcttgtcacagatatgtcctggacccttaacaaggcaaactcaaaagggatt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 681 atattccatcttgtcacagatatgtcctggacccttaacaaggcaaactcaaaaggggtt 740
Query: 541 ttgttttgttttgttttgnttttcctgataaataatagaa 580
|||||||||||||||||| |||||||||||||||||||||
Sbjct: 741 ttgttttgttttgttttgtttttcctgataaataatagaa 780
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 580
Length of database: 980
Length adjustment: 10
Effective length of query: 570
Effective length of database: 970
Effective search space: 552900
Effective search space used: 552900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no262_f05.g1 MSMg01no262_f05.g1 CHROMAT_FILE:
MSMg01no262_f05.g1 PHD_FILE: MSMg01no262_f05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:57 2005
(212 letters)
>mm_chr1_188233991_188234603
Length = 613
Score = 377 bits (195), Expect = e-109
Identities = 207/211 (98%), Gaps = 1/211 (0%)
Strand = Plus / Minus
Query: 1 tctatttcctcctatccactcagatcccatgtcctacttctatgtttcaagtgtcaaaac 60
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 411 tctatttcctcctatccactcagatcccatgtcctacttctacgtttcaagtgtcaaaac 352
Query: 61 ccctttcc-aatattgtttgcacatcccagaagagaactgtgagggttatgtaggagaca 119
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 351 ccctttccaaatattgtttgcacatcccagaagagaactgtgagggttatgtaggagaca 292
Query: 120 gggtttcccaggtagaggaggcggcatgagttcctttcacggggcatgctattgtcaccg 179
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 291 gggtttcccaggtagaggaggcggcatgagttcctttcacggggcatgctatcgtcaccg 232
Query: 180 gatcagaagttcattccttcccagctagagc 210
|||||||| ||||||||||||||||||||||
Sbjct: 231 gatcagaaattcattccttcccagctagagc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 212
Length of database: 613
Length adjustment: 9
Effective length of query: 203
Effective length of database: 604
Effective search space: 122612
Effective search space used: 122612
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
