Query= MSMg01no262_f07.b1 MSMg01no262_f07.b1 CHROMAT_FILE:
MSMg01no262_f07.b1 PHD_FILE: MSMg01no262_f07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:57 2005
(699 letters)
>mm_chr1_111471910_111473008
Length = 1099
Score = 1212 bits (627), Expect = 0.0
Identities = 657/667 (98%)
Strand = Plus / Minus
Query: 5 gaattcttgtgtcactgtgagtgtagacttaagccccttaccctaattgctgaagtcagt 64
|||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 667 gaattcttgtgtcactgtgaatgtagacttaagcaccttaccctaattgctgaagtcagt 608
Query: 65 cttccactagcacccttcagataaagatgttgagctttcagctctgcttgcaccatacca 124
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 cttccactagcagccttcagataaagatgttgagctttcagctctgcttgcaccatacca 548
Query: 125 gccatggtcatagtgtctgttcacagcaataaaaccctaactaatacagtattgaaagag 184
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 gccatggtcatggtgtctgttcacagcaataaaaccctaactaatacagtattgaaagag 488
Query: 185 acatagagcaaagatagaacttatatgatttacctatcagagatatgtcatgccttttca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 487 acatagagcaaagatagaacttatatgatttacctatcagagatatgtcatgccttttca 428
Query: 245 aatatgtgttgtcaatttttaagattttactgaaaagacatgactttatggtactgtgcc 304
||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 427 aatatgtgttgtcaatttttaagatataactgaaaagacatgactttatggtactgtgcc 368
Query: 305 aggaaatggttgtgaaccctcaaaacaccactaagaagtagattcagatataatcatatt 364
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 aggaaatggtcgtgaaccctcaaaacaccactaagaagtagattcagatataatcatatt 308
Query: 365 aggatcttttatttaagctcaaacttgggccacaccaccatctctgacacaggagaacag 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 aggatcttttatttaagctcaaacttgggccacaccaccatctctgacacaggagaacag 248
Query: 425 gaggaaggcacaagcccagtttcaggcaagcatttataaaggcaagaagagggtatctag 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 247 gaggaaggcacaagcccagtttcaggcaagcatttataaaggcaagaagagggtatctag 188
Query: 485 cctagtacacatctgatttgagggccattatgtcctttaacatatttgggcagtgctggg 544
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 187 cctagtacacatctgatttgagggccattatggcctttaacatatttgggcagtgctggg 128
Query: 545 aggcaaaccataaatgtaatttctgttttctcctgattggtggtttttaggaagcgaagt 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 127 aggcaaaccataaatgtaatttctgttttctcctgattggtggtttttaggaagcgaagt 68
Query: 605 atccctggaaggcttgtaacatggatgtatagatttgttgaggaataactggatatctgg 664
||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 67 atccctggaaggcttgttacgtggatgtatagatttgttgaggaataactggatatctgg 8
Query: 665 tgttaaa 671
|||||||
Sbjct: 7 tgttaaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 699
Length of database: 1099
Length adjustment: 10
Effective length of query: 689
Effective length of database: 1089
Effective search space: 750321
Effective search space used: 750321
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no262_f07.g1 MSMg01no262_f07.g1 CHROMAT_FILE:
MSMg01no262_f07.g1 PHD_FILE: MSMg01no262_f07.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:58:57 2005
(397 letters)
>mm_chr1_111315727_111316523
Length = 797
Score = 646 bits (334), Expect = 0.0
Identities = 372/394 (94%), Gaps = 15/394 (3%)
Strand = Plus / Plus
Query: 1 atttaaagtaaagaaaactttacaaaacatcagtctaagtgccaaacatacaggaataag 60
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 atttaaagtaaagaaaactttacaaaacatcagtctaagtgccaaacatagaggaataag 260
Query: 61 gcctttttggatacttatgtgatggatcttagtcccctgttcccaaccaagaatgaatta 120
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 261 gcctttttggatacttatgtgatgaatcttagtcccctgttcccaaccaagaatgaatta 320
Query: 121 gattcagtgatcagaaatgctctttatggactctatgtccataatattttaaatagagaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gattcagtgatcagaaatgctctttatggactctatgtccataatattttaaatagagaa 380
Query: 181 caatgttcagaaaaacggaaatcagaaaatgcttataccagtgcaggtagactaaggcaa 240
||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 caatgttcagaaaaatgcaaatcagaaaatgcttataccagtgcaggtagactaaggcaa 440
Query: 241 atgtgtctccagctttaaaagtctgattacatctttttcttttcttttcttttcttttct 300
||||||||| |||||||||||| |||||||||||||||||||||||||
Sbjct: 441 atgtgtctctagctttaaaagtatgattacatctttttcttttctttt------------ 488
Query: 301 ttttaacatttgcaatatcagtgttcataaaggtgtgatattatttatttctgtctgtaa 360
|||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 489 ---taacatttgcaacatcagtgttcataaaggtgtgatattatttatttctgtctgtaa 545
Query: 361 gttataaaaacaagttttgtttgtttaagtttac 394
||||||||||||||||||||||||||||||||||
Sbjct: 546 gttataaaaacaagttttgtttgtttaagtttac 579
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 397
Length of database: 797
Length adjustment: 9
Effective length of query: 388
Effective length of database: 788
Effective search space: 305744
Effective search space used: 305744
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
