Query= MSMg01no262_l01.b1 MSMg01no262_l01.b1 CHROMAT_FILE:
MSMg01no262_l01.b1 PHD_FILE: MSMg01no262_l01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:24 2005
(691 letters)
>mm_chr1_82200312_82201402
Length = 1091
Score = 1321 bits (683), Expect = 0.0
Identities = 686/687 (99%)
Strand = Plus / Plus
Query: 5 gaattcacaagcattccggtttgcactttcacacactgttaaaaggcaggagaatcagat 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcacaagcattccggtttgcactttcacacactgttaaaaggcaggagaatcagat 264
Query: 65 ttcacagcactgctaaggagctggcaaggacttcaaagggattttgaagtacctattact 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 ttcacagcactgctaaggagctggcaaggacttcaaagggattttgaagtacctattact 324
Query: 125 ttattaagcaagggtaataatgatctacaaagcaccagctactcatgttttcctgtttgt 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 ttattaagcaagggtaataatgatctacaaagcaccagctactcatgttttcctgtttgt 384
Query: 185 ctgcatttccttgcaaataccgcagtctcaattttcctgcctaaataccagtttgtacgc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ctgcatttccttgcaaataccgcagtctcaattttcctgcctaaataccagtttgtacgc 444
Query: 245 tgcctttaaaattatagatgagacagccgtcaccaacaaagagcagaagccacagccaca 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 tgcctttaaaattatagatgagacagccgtcaccaacaaagagcagaagccacagccaca 504
Query: 305 gtgggccaaaacgtctgctgtagaataatttgtctcttgtcactgtgcccgtgcctatgt 364
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 505 gtgggccaaaacgtctgctgtagaataatttgtctcttgtcactgtgcctgtgcctatgt 564
Query: 365 gtatattatccttctatctccttcatttctaccttcgtcatatttccaccaacattgtga 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 gtatattatccttctatctccttcatttctaccttcgtcatatttccaccaacattgtga 624
Query: 425 aacccaatgttagcccattatgagtggcgtgttcctatgacaatctagcaggcatttccg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 aacccaatgttagcccattatgagtggcgtgttcctatgacaatctagcaggcatttccg 684
Query: 485 tgcgcagttacagttgcttcaatacttgctaactccagtgcaaacactctatttttacat 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 tgcgcagttacagttgcttcaatacttgctaactccagtgcaaacactctatttttacat 744
Query: 545 ttaagaactatgtaacctaggcttggagacaagtctgtatcacaggaagcagatgcgcaa 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 ttaagaactatgtaacctaggcttggagacaagtctgtatcacaggaagcagatgcgcaa 804
Query: 605 attttagattaattgtaaatttggagacatgaattatactttgtggtgctccattagcta 664
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 attttagattaattgtaaatttggagacatgaattatactttgtggtgctccattagcta 864
Query: 665 ctctgctgtcttaggaattaactttaa 691
|||||||||||||||||||||||||||
Sbjct: 865 ctctgctgtcttaggaattaactttaa 891
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 691
Length of database: 1091
Length adjustment: 10
Effective length of query: 681
Effective length of database: 1081
Effective search space: 736161
Effective search space used: 736161
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no262_l01.g1 MSMg01no262_l01.g1 CHROMAT_FILE:
MSMg01no262_l01.g1 PHD_FILE: MSMg01no262_l01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:24 2005
(385 letters)
>mm_chr1_82346814_82347599
Length = 786
Score = 675 bits (349), Expect = 0.0
Identities = 377/391 (96%), Gaps = 11/391 (2%)
Strand = Plus / Minus
Query: 1 tgggattaagttaaacgtagaaaacataagggtaaaaactgcacgttgacggagtaaata 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 660 tgggattaagttaaacgtagaaaacataagggtaaaaactgcacgttgacggagtaaata 601
Query: 61 aataaataaataaagtgtatagcagggtcagaggtaagccacagctgtaggatagggctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 600 aataaataaataaagtgtatagcagggtcagaggtaagccacagctgtaggatagggctt 541
Query: 121 ttcctgggtggacaatgaagggaactctcttaattatcacacagatatgtttttaacttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 540 ttcctgggtggacaatgaagggaactctcttaattatcacacagatatgtttttaacttt 481
Query: 181 tctgcagtgaatatgctagtctttcaatttgaatatggaaaatgagcagcttttcctttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 480 tctgcagtgaatatgctagtctttcaatttgaatatggaaaatgagcagcttttcctttt 421
Query: 241 gttattggtttattttcagcttatttgtaatgaactctgtgtgtgtgtgtatgtgt--ac 298
|||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct: 420 gttattggtttattttcagcttatttgtaatgaactctgtgtgtgtgtgtgtgtgtgtac 361
Query: 299 agccagtgcaataagctcctgctgctatgacgtgtagcttcatgtgtgcg--cccccc-- 354
|||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 360 agccagtgcaataagctcctgctgctatgacgtgtagcttcatgtgtgtgtgc-----at 306
Query: 355 gcacagtatgtgtgattgcttgtgtgtgtac 385
||||||||||| |||||||||||||||||||
Sbjct: 305 gcacagtatgtatgattgcttgtgtgtgtac 275
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 385
Length of database: 786
Length adjustment: 9
Effective length of query: 376
Effective length of database: 777
Effective search space: 292152
Effective search space used: 292152
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
