Query= MSMg01no262_p01.b1 MSMg01no262_p01.b1 CHROMAT_FILE:
MSMg01no262_p01.b1 PHD_FILE: MSMg01no262_p01.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:42 2005
(660 letters)
>mm_chr1_126575812_126576871
Length = 1060
Score = 665 bits (344), Expect = 0.0
Identities = 344/344 (100%)
Strand = Plus / Minus
Query: 316 atcacagaaatctagatcctcttgttactgttattcaaggttggtattccatcctcaact 375
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1060 atcacagaaatctagatcctcttgttactgttattcaaggttggtattccatcctcaact 1001
Query: 376 aattttctctagaaattccctcatagacaatcccagaggctaagctaaactagataatct 435
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1000 aattttctctagaaattccctcatagacaatcccagaggctaagctaaactagataatct 941
Query: 436 ctcacaaaattcccagagaattgtcttctagataagtatcttctagatcttcttaactga 495
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 940 ctcacaaaattcccagagaattgtcttctagataagtatcttctagatcttcttaactga 881
Query: 496 aaatcaatataaactaccacattcagagaagtgaaattgtagtctgttttgacatataat 555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 880 aaatcaatataaactaccacattcagagaagtgaaattgtagtctgttttgacatataat 821
Query: 556 caggtatcatttataattgcccatttaagtacatatattgacaactgttcattttaaaat 615
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 820 caggtatcatttataattgcccatttaagtacatatattgacaactgttcattttaaaat 761
Query: 616 aaatgtttagtgtttttctttctctttctttcttttttttgctg 659
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 760 aaatgtttagtgtttttctttctctttctttcttttttttgctg 717
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 660
Length of database: 1060
Length adjustment: 10
Effective length of query: 650
Effective length of database: 1050
Effective search space: 682500
Effective search space used: 682500
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no262_p01.g1 MSMg01no262_p01.g1 CHROMAT_FILE:
MSMg01no262_p01.g1 PHD_FILE: MSMg01no262_p01.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 20:59:42 2005
(348 letters)
>mm_chr1_126428391_126429138
Length = 748
Score = 646 bits (334), Expect = 0.0
Identities = 343/346 (99%), Gaps = 1/346 (0%)
Strand = Plus / Plus
Query: 1 ttatcttcacaaatttgaactacataagggaacgttctttataaattatgaagactcagg 60
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 201 ttatcttcacaaatttgaactacataagggaccgttctttataaattatgaagactcagg 260
Query: 61 ttattttgagaaacaataacaaaatgattatgtattttaagtccttctgttgaaaagcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttattttgagaaacaataacaaaatgattatgtattttaagtccttctgttgaaaagcca 320
Query: 121 gttcataatggactggaaagattgcttggtggataggagtgtttcttacactttcagaag 180
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 321 gttcataatggactggaaagattgcttggtggatagaagtgtttcttacactttcagaag 380
Query: 181 atgtgggttcaattcccagcatctacatggtggtttgtaactacttctaatgctctcttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgtgggttcaattcccagcatctacatggtggtttgtaactacttctaatgctctcttc 440
Query: 241 tagtttccttgagctcctgaatgcatgaagtaccacaaatcatgacagcacatatatgta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tagtttccttgagctcctgaatgcatgaagtaccacaaatcatgacagcacatatatgta 500
Query: 301 cactaccaatagtaaataaatattttttaaaaatttttgcaaatat 346
||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 501 cactaccaatagtaaataaatattttttaaaaatttt-gcaaatat 545
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 348
Length of database: 748
Length adjustment: 9
Effective length of query: 339
Effective length of database: 739
Effective search space: 250521
Effective search space used: 250521
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
