Query= MSMg01no263_m10.b1 MSMg01no263_m10.b1 CHROMAT_FILE:
MSMg01no263_m10.b1 PHD_FILE: MSMg01no263_m10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:47 2005
(267 letters)
>mm_chr1_166216063_166216729
Length = 667
Score = 381 bits (197), Expect = e-110
Identities = 209/215 (97%), Gaps = 4/215 (1%)
Strand = Plus / Plus
Query: 53 tctctctctctctctctctctctccccctctctctatctctctctctctctcctcagcaa 112
||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||
Sbjct: 257 tctctctctctctctctctctct----ctctctctctctctctctctctctcctcagcaa 312
Query: 113 gtgaacagagacccacagcaagcttttcggttatggcttaagaaaaagcatgaggagcag 172
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 313 gtgaacagagacccacagcaagcttttcggttatggcttaagaaaaagcatgaggagcag 372
Query: 173 atgaaagaaaggaagacagaagaactcagaaagcaagaggagtgtttgttcttcctgaga 232
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 373 atgaaagaaaggaagacagaagaactcagaaagcaagaggagtgtttgttcttcctgagg 432
Query: 233 ggaacagagggccgcgagagagcctttcgacagta 267
|||||||||||||||||||||||||||||||||||
Sbjct: 433 ggaacagagggccgcgagagagcctttcgacagta 467
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 70
Number of extensions: 28
Number of successful extensions: 28
Number of sequences better than 10.0: 1
Number of HSP's gapped: 28
Number of HSP's successfully gapped: 1
Length of query: 267
Length of database: 667
Length adjustment: 9
Effective length of query: 258
Effective length of database: 658
Effective search space: 169764
Effective search space used: 169764
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no263_m10.g1 MSMg01no263_m10.g1 CHROMAT_FILE:
MSMg01no263_m10.g1 PHD_FILE: MSMg01no263_m10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:47 2005
(335 letters)
>mm_chr1_166372881_166373615
Length = 735
Score = 549 bits (284), Expect = e-161
Identities = 320/332 (96%), Gaps = 1/332 (0%)
Strand = Plus / Minus
Query: 3 gttagaatttacacaaggttttcaccttacttcacaacaatgaaaaagggacgcatgata 62
||||||||||||||||||||||||||||||||||| || |||| ||||||||||||||||
Sbjct: 332 gttagaatttacacaaggttttcaccttacttcacgacgatgagaaagggacgcatgata 273
Query: 63 agcaaggagaaatcatgaaggagaaatgagttaatgaaatagccattatgacaagaatag 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 agcaaggagaaatcatgaaggagaaatgagttaatgaaatagccattatgacaagaatag 213
Query: 123 ccatacataatgtcttagtcagggtttctattcctgcac-aaacatcatgaccaagaagc 181
||||||||||| ||||||||||||||||||||||||||| ||||||||||||| ||||||
Sbjct: 212 ccatacataatatcttagtcagggtttctattcctgcacaaaacatcatgaccgagaagc 153
Query: 182 aagttggggaggaaagggtttattcagcttacgtttccacattgctgttcatcaccaaag 241
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 aagttggggaggaaagggtttattcagcttacgtttccacattgctgttcatcaccaaag 93
Query: 242 gaagtcaggactggaactcaagcaggtcagggagcaggagctgatgcataggccatgcac 301
|||||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 92 gaagtcaggactggaactcaagcaggtcagggagcaggagctgatgcagaagccatgggg 33
Query: 302 gcatgttcttactggcttgcttcccctggctt 333
| ||||||||||||||||||||||||||||||
Sbjct: 32 ggatgttcttactggcttgcttcccctggctt 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 335
Length of database: 735
Length adjustment: 9
Effective length of query: 326
Effective length of database: 726
Effective search space: 236676
Effective search space used: 236676
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
