Query= MSMg01no263_n06.b1 MSMg01no263_n06.b1 CHROMAT_FILE:
MSMg01no263_n06.b1 PHD_FILE: MSMg01no263_n06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:51 2005
(323 letters)
>mm_chr1_167724664_167725384
Length = 721
Score = 526 bits (272), Expect = e-154
Identities = 293/300 (97%), Gaps = 2/300 (0%)
Strand = Plus / Minus
Query: 24 cgcattagggcttagcagttaagagcactgattgcccttctagaggacctgaggctcaat 83
||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct: 702 cgcattagggcttagcagttaagagcactgattgcccttctagaggacctggggttcaat 643
Query: 84 tcccagtacccacttggcaattcacaactgtctgaaactccaagatctgacacctcatac 143
||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 642 tcccagtacccacatggcaattcacagctgtctgaaactccaagatctgacacctcatac 583
Query: 144 aggcatgcatgcaggcaaaacatcaatgcgcataaaataaaaataaataatttttaaaaa 203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 aggcatgcatgcaggcaaaacatcaatgcgcataaaataaaaataaataatttttaaaaa 523
Query: 204 atcactttagaatctagggctatcattgtactattccttgagagtattgaatagccaccc 263
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 atcactttagaatctagggctatcattgtactattccttgagagtattgaatagccaccc 463
Query: 264 aataaggcttttccatctcgtatcaaaatatattcctaacatgttcttttagtcaattct 323
||||||||||||||| | || |||||||||||||||||||||||||||||||||||||||
Sbjct: 462 aataaggcttttcca-c-cggatcaaaatatattcctaacatgttcttttagtcaattct 405
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 323
Length of database: 721
Length adjustment: 9
Effective length of query: 314
Effective length of database: 712
Effective search space: 223568
Effective search space used: 223568
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no263_n06.g1 MSMg01no263_n06.g1 CHROMAT_FILE:
MSMg01no263_n06.g1 PHD_FILE: MSMg01no263_n06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:00:51 2005
(540 letters)
>mm_chr1_167578858_167579797
Length = 940
Score = 1006 bits (520), Expect = 0.0
Identities = 535/540 (99%)
Strand = Plus / Plus
Query: 1 agaataagaaccaacccggaagattcatcatttatttatgttaacctttcttcagcagga 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 201 agaataagaaccaacccggaagattcatcatttatttatgttaacatttcttcagcagga 260
Query: 61 gttcatggaggggagggtgatcagaggaatggatatcagaccgacccatattcctgcaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttcatggaggggagggtgatcagaggaatggatatcagaccgacccatattcctgcaaa 320
Query: 121 ccctgttttatccccggacaggatactgagcaggagttcctgatgaaaacaggctggaga 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ccctgttttatccccggacaggatactgagcaggagttcctgatgaaaacaggctggaga 380
Query: 181 ccctaactcatgcctcctgagtccgggagaagaacttggagttgagaaatgcttactgag 240
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 381 ccctaactcatgcctcctgagtctgggagaagaacttggagttgagaaatgcttactgag 440
Query: 241 aaccaggcacagtgatgcatacccacaatctagaggcagaggcagggggatcactaattc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 aaccaggcacagtgatgcatacccacaatctagaggcagaggcagggggatcactaattc 500
Query: 301 aaaaccagcctgggctacatataagtctacatggtgagatttgacaaaacaaaaacaaaa 360
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 501 aaaaccagcctgggctacatataagtctacatggtgagatttgaaaaaacaaaaacaaaa 560
Query: 361 gcaaacaaacaaaacttcatagagaagtgaagagagacgctctcagaaggtaagctgtac 420
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 561 gcaaacaaacaaaacttcatagagaagcgaagagagacgctctcagaaggtaagctgtac 620
Query: 421 tgcggacactgaacgtccctcccagaggccggccagtttcctgttcaagtgtaaccttcc 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgcggacactgaacgtccctcccagaggccggccagtttcctgttcaagtgtaaccttcc 680
Query: 481 aggagagtacaacccatgctcagagcaaggcaggcacatggtggcaccttgaggggtgga 540
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 681 aggagagtacaacccatgctcagagcaaggcaggcatatggtggcaccttgaggggtgga 740
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 540
Length of database: 940
Length adjustment: 10
Effective length of query: 530
Effective length of database: 930
Effective search space: 492900
Effective search space used: 492900
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
