Query= MSMg01no264_d21.b1 MSMg01no264_d21.b1 CHROMAT_FILE:
MSMg01no264_d21.b1 PHD_FILE: MSMg01no264_d21.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:22 2005
(316 letters)
>mm_chr1_140410308_140411024
Length = 717
Score = 572 bits (296), Expect = e-168
Identities = 308/312 (98%), Gaps = 1/312 (0%)
Strand = Plus / Plus
Query: 5 gaattcttaagtctattaaaattcactttggtctccatatgaaataattttagactgaca 64
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 205 gaattcttaagtctattaaaattcactttggtctccatatgaaataattttagactgata 264
Query: 65 cattacccagatctggagaggtacataaatgtgtaatccctaagtagaacatttgcaaaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 cattacccagatctggagaggtacataaatgtgtaatccctaagtagaacatttgcaaaa 324
Query: 125 tgtagtaaaactc-gactgaatccactttgaattgttcaaaattgttgtgtgattcggat 183
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tgtagtaaaactcagactgaatccactttgaattgttcaaaattgttgtgtgattcggat 384
Query: 184 ttcaggttaatcattagttcggtaaagctcaaacactacagcctactcaagagtgactgc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttcaggttaatcattagttcggtaaagctcaaacactacagcctactcaagagtgactgc 444
Query: 244 aaggcagcatttaaacaagtggcatgtgtgtacaagcacgtgcaattagtgtgtgtgcac 303
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aacgcagcatttaaacaagtggcatgtgtgtacaagcacgtgcaattagtgtgtgtgcac 504
Query: 304 atgcagtgataa 315
||||| ||||||
Sbjct: 505 atgcaatgataa 516
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 316
Length of database: 717
Length adjustment: 9
Effective length of query: 307
Effective length of database: 708
Effective search space: 217356
Effective search space used: 217356
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no264_d21.g1 MSMg01no264_d21.g1 CHROMAT_FILE:
MSMg01no264_d21.g1 PHD_FILE: MSMg01no264_d21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:22 2005
(286 letters)
>mm_chr1_140496396_140497080
Length = 685
Score = 522 bits (270), Expect = e-153
Identities = 282/286 (98%), Gaps = 1/286 (0%)
Strand = Plus / Minus
Query: 1 tacagtaggattaataaggttggtcattagacgaggctgaagacctactccataaattgc 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 485 tacagtaggattaataaggttggtcattagacgaggctgaagacctactttataaattgc 426
Query: 61 ccagtgctgagaagtagcactgtaataactggaatgagaaaagtaatattcttataactg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 ccagtgctgagaagtagcactgtaataactggaatgagaaaagtaatattcttataactg 366
Query: 121 gaataacaaaaggcatgggggctgccttcatagttagatttctaaaccttggtttctaaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 gaataacaaaaggcatgggggctgccttcatagttagatttctaaaccttggtttctaaa 306
Query: 181 tctgggctttaaattttttatagtaactgaatagagagcttctaatccgtgtcattgaat 240
||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 305 tctgggctttaaa-tttttatagtaactgaataaagagcttctaatccgtgtcattgaat 247
Query: 241 taaatcttctaatctgtgtcattgaattgctgtactaaagcctgcc 286
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 246 taaatcttctaatctgtgtcattgaattgctgtactaaagcctgcc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 286
Length of database: 685
Length adjustment: 9
Effective length of query: 277
Effective length of database: 676
Effective search space: 187252
Effective search space used: 187252
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
