Query= MSMg01no264_f18.b1 MSMg01no264_f18.b1 CHROMAT_FILE:
MSMg01no264_f18.b1 PHD_FILE: MSMg01no264_f18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:30 2005
(320 letters)
>mm_chr1_144009556_144010275
Length = 720
Score = 598 bits (309), Expect = e-175
Identities = 312/313 (99%)
Strand = Plus / Plus
Query: 5 gaattccattagataatgcggcattattgctcttctttcatgaaaactgacagcctagtc 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccattagataatgcggcattattgctcttctttcatgaaaactgacagcctagtc 264
Query: 65 tatctgtcctacaagctttataatagtgaaataaatcagtttcatatttcaaaatattaa 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 tatctgtcctacaagctttataatagtgaaataaatcagtttcatatttcaaaatattaa 324
Query: 125 atcttcactagtttattggactaattttaagaaacaaccattaaacatccaaaactcacc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 atcttcactagtttattggactaattttaagaaacaaccattaaacatccaaaactcacc 384
Query: 185 agtattgtaacaaacatttcatatgctatgtattagatgcagcattttagcaaattcttc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 agtattgtaacaaacatttcatatgctatgtattagatgcagcattttagcaaattcttc 444
Query: 245 aatgaccatgatatacttttttccattgtgtgtataggtgttttttttttctgtaatgtg 304
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 aatgaccatgatatatttttttccattgtgtgtataggtgttttttttttctgtaatgtg 504
Query: 305 aaaaacactttta 317
|||||||||||||
Sbjct: 505 aaaaacactttta 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 320
Length of database: 720
Length adjustment: 9
Effective length of query: 311
Effective length of database: 711
Effective search space: 221121
Effective search space used: 221121
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no264_f18.g1 MSMg01no264_f18.g1 CHROMAT_FILE:
MSMg01no264_f18.g1 PHD_FILE: MSMg01no264_f18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:31 2005
(288 letters)
>mm_chr1_144140420_144141106
Length = 687
Score = 524 bits (271), Expect = e-153
Identities = 283/287 (98%), Gaps = 1/287 (0%)
Strand = Plus / Minus
Query: 1 tgaaaacagcaaaaaattttttaacaacaatataaaagaaaaatatctcaaactttctgc 60
|||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 486 tgaaaacagc-aaaaatcttttaacaacaatataaaagaaaaatatctcagactttctgc 428
Query: 61 cttttaagtgtttccaaaagaaaaaccatccatttctattgaaagaaaatttactcagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 427 cttttaagtgtttccaaaagaaaaaccatccatttctattgaaagaaaatttactcagtg 368
Query: 121 agaattagaaagggtgaactatttccttgcttccctttcttcaaatcatagtaaaatctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 367 agaattagaaagggtgaactatttccttgcttccctttcttcaaatcatagtaaaatctt 308
Query: 181 caggtaaaaattagattttgagttaatgacagatataaaaaatgaatgatagtgaatcca 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 307 caggtaaaaattagattttgagttaatgacagatataaaaaatgaatgatagtgaatcca 248
Query: 241 aaagctcttattaaagtctgacatcatctagtattgggtcagtgagg 287
||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 247 aaagctcttataaaagtctgacatcatctagtattgggtcagtgagg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 288
Length of database: 687
Length adjustment: 9
Effective length of query: 279
Effective length of database: 678
Effective search space: 189162
Effective search space used: 189162
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
