Query= MSMg01no264_g09.b1 MSMg01no264_g09.b1 CHROMAT_FILE:
MSMg01no264_g09.b1 PHD_FILE: MSMg01no264_g09.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:34 2005
(274 letters)
>mm_chr1_69574841_69575514
Length = 674
Score = 530 bits (274), Expect = e-155
Identities = 274/274 (100%)
Strand = Plus / Plus
Query: 1 aaggtctgctaaaattttcactagtaaaaatcttaacttcagattatttcttgccttaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaggtctgctaaaattttcactagtaaaaatcttaacttcagattatttcttgccttaca 260
Query: 61 ccttagccctgtattcctcagtgcctctccttgccctctgcgttgcctatgccagcaagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccttagccctgtattcctcagtgcctctccttgccctctgcgttgcctatgccagcaagt 320
Query: 121 tcaattgggatcattctaagaatcagaaggagaaaaatgctaaaatatttctgttggtat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcaattgggatcattctaagaatcagaaggagaaaaatgctaaaatatttctgttggtat 380
Query: 181 ttagctttttgactgattttggatgtttacaaaatgaacaaacaaacaaaccaaccataa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttagctttttgactgattttggatgtttacaaaatgaacaaacaaacaaaccaaccataa 440
Query: 241 tttaagaggactctgtttccttgaaaataaaatg 274
||||||||||||||||||||||||||||||||||
Sbjct: 441 tttaagaggactctgtttccttgaaaataaaatg 474
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space: 176225
Effective search space used: 176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no264_g09.g1 MSMg01no264_g09.g1 CHROMAT_FILE:
MSMg01no264_g09.g1 PHD_FILE: MSMg01no264_g09.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:01:34 2005
(236 letters)
>mm_chr1_69728221_69728855
Length = 635
Score = 426 bits (220), Expect = e-124
Identities = 232/236 (98%), Gaps = 1/236 (0%)
Strand = Plus / Minus
Query: 1 cctcaagtgattttagccattggcttgaaattctgattgagctatttgacttgacttcat 60
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 435 cctcaggtgattttagccattggcttgaaattctgattgagctatttgacttgacttcat 376
Query: 61 ttaaaagttttctttctttttatgaatgaggaaaacgtattcaggacatttcattcttga 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 375 ttaaaagttttctttctttttatgaatgaggaaaacgtattcaggacatttcattcttga 316
Query: 121 aggcggcctctgtgatgtaggaaggaaaaaatcctggtggtgttgagtgattcatgctga 180
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 315 aggcggcctctgtgatgtagaaaggaaaaaatcctggtggtgttgagtgattcatgctga 256
Query: 181 attatattgttaaactcttgtaatggatttgtagcactttggttttttttgcttat 236
||||||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 255 attatattgtttaactcttgtaatggatttgtagcactttgg-tttttttgcttat 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 236
Length of database: 635
Length adjustment: 9
Effective length of query: 227
Effective length of database: 626
Effective search space: 142102
Effective search space used: 142102
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
