Query= MSMg01no265_l23.b1 MSMg01no265_l23.b1 CHROMAT_FILE:
MSMg01no265_l23.b1 PHD_FILE: MSMg01no265_l23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:20 2005
(319 letters)
>mm_chr1_72257568_72258288
Length = 721
Score = 601 bits (311), Expect = e-176
Identities = 315/317 (99%), Gaps = 2/317 (0%)
Strand = Plus / Plus
Query: 5 gaattccaccctacatcctgtgccctaatttcaattctgttccctggggcacgacttggt 64
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattccaccctacatcctgtgccctaatttcaattctgttccctggggcacgacttggt 264
Query: 65 gggacctcattcgataaggttaacctggcatggtggaacttaatttcagcaaactcacga 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gggacctcattcgataaggttaacctggcatggtggaacttaatttcagcaaactcacga 324
Query: 125 tagggaggaagaaaaaaacaaaaaacaaaaaaccaacattttaaggaaaaataaaaatca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 tagggaggaagaaaaaaacaaaaaacaaaaaaccaacattttaaggaaaaataaaaatca 384
Query: 185 cagtcctatctcttctctctctaggagccggcaaccacgcttgggtatgtcttatttctg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 cagtcctatctcttctctctctaggagccggcaaccacgcttgggtatgtcttatttctg 444
Query: 245 agtgcctttttcttctacccctcgtgcttatacgtatattaaagtatcgcttt--gggaa 302
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 445 agtgcctttttcttctacccctcgtgcttatacgtatattaaagtatcgctttaggggaa 504
Query: 303 aaaaaaaaaaagtcaag 319
|||||||||||||||||
Sbjct: 505 aaaaaaaaaaagtcaag 521
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 319
Length of database: 721
Length adjustment: 9
Effective length of query: 310
Effective length of database: 712
Effective search space: 220720
Effective search space used: 220720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no265_l23.g1 MSMg01no265_l23.g1 CHROMAT_FILE:
MSMg01no265_l23.g1 PHD_FILE: MSMg01no265_l23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 21:03:20 2005
(291 letters)
>mm_chr1_72393421_72394111
Length = 691
Score = 549 bits (284), Expect = e-161
Identities = 287/288 (99%)
Strand = Plus / Minus
Query: 1 tggaacgtcaatgccacatacccaaaggattctgtacaatggatattttcttctagtttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 tggaacgtcaatgccacatacccaaaggattctgtacaatggatattttcttctagtttt 429
Query: 61 ttatttatatggagattaatatagattctgaacaagctgtgaagaagaaaacactttctt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ttatttatatggagattaatatagattctgaacaagctgtgaagaagaaaacactttctt 369
Query: 121 agccctctgcaagcttagctcatacaccataggaaacacattccactccttaacctgtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 agccctctgcaagcttagctcatacaccataggaaacacattccactccttaacctgtaa 309
Query: 181 aggcctaccaaatgtcatgggtcaagcacgtcagtgacccactgacagaacagctaaagg 240
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 aggcctcccaaatgtcatgggtcaagcacgtcagtgacccactgacagaacagctaaagg 249
Query: 241 gccatggtggctgtgggtctccaccgaagacctcaccgacacttaacc 288
||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 248 gccatggtggctgtgggtctccaccgaagacctcaccgacacttaacc 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 691
Length adjustment: 9
Effective length of query: 282
Effective length of database: 682
Effective search space: 192324
Effective search space used: 192324
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
